Regulon of LexA in Chloroflexus sp. Y-400-fl
| Regulator type: | Transcription factor |
| TF locus tag: | Chy400_0511 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Chloroflexia |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Chloroflexi
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -30
Score: 4.6 Sequence: TAGCAAATCTGTGCGG
Locus tag: Chy400_0368
Name: polA Funciton: DNA polymerase I (EC 2.7.7.7) |
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polA
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DNA polymerase I (EC 2.7.7.7)
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Position: -177
Score: 5.2 Sequence: TAGAACACTTGTTCTA
Locus tag: Chy400_2036
Name: Cagg_1574 Funciton: Conserved hypothetical protein
Locus tag: Chy400_2037
Name: Cagg_1573 Funciton: Conserved hypothetical protein |
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Cagg_1574
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Conserved hypothetical protein
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Cagg_1573
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Conserved hypothetical protein
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Position: -88
Score: 4.6 Sequence: TCGCACAATAGTTCGA
Locus tag: Chy400_0945
Name: ssb Funciton: Single-stranded DNA-binding protein |
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ssb
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Single-stranded DNA-binding protein
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Position: -85
Score: 4.4 Sequence: TAGAACATATGAACTA
Locus tag: Chy400_3255
Name: Cagg_3684 Funciton: Conserved hypothetical protein
Locus tag: Chy400_3254
Name: gyrB Funciton: DNA gyrase subunit B (EC 5.99.1.3) |
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Cagg_3684
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Conserved hypothetical protein
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gyrB
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DNA gyrase subunit B (EC 5.99.1.3)
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Position: -126
Score: 5.3 Sequence: TCGCACACCTGTGCTA
Position: -107
Score: 4.8 Sequence: TAGCACATATGTACGG
Locus tag: Chy400_1482
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -37
Score: 4.8 Sequence: GCGTACACCTGTGCGA
Locus tag: Chy400_3332
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -67
Score: 4.6 Sequence: TCGCACAAATATGCTA
Locus tag: Chy400_1345
Name: ftsK Funciton: Cell division protein FtsK |
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ftsK
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Cell division protein FtsK
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Position: -74
Score: 4.5 Sequence: TGGCACAATTGTTCGG
Locus tag: Chy400_2955
Name: parB Funciton: Chromosome partitioning protein ParB |
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parB
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Chromosome partitioning protein ParB
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Position: -101
Score: 4.4 Sequence: ACGAACATTTGTCCTA
Locus tag: Chy400_0262
Name: uvdE Funciton: UV damage repair endonuclease-like protein |
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uvdE
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UV damage repair endonuclease-like protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |