Regulon of LiuR2 in Rhodoferax ferrireducens DSM 15236

Properties
Regulator type:	Transcription factor
TF locus tag:	Rfer_2820
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Acyclic terpenes degradation
Effector:
Regulog:	LiuR2 - Comamonadaceae
Statistics of regulated genes:
- Genes	7
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Comamonadaceae
By TF family - MerR
By pathway - Acyclic terpenes degradation

Regulated operons
	Locus Tag	Name	Function
Position: -127 Score: 5.6 Sequence: GGTGACGTTAACGTCAAC Locus tag: Rfer_2819 Name: null Funciton: Sterol carrier family protein Locus tag: Rfer_2820 Name: liuR2 Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	Rfer_2819		Sterol carrier family protein
	Rfer_2820	liuR2	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Position: -57 Score: 5.6 Sequence: GTTGACGTTAACGTCACC Locus tag: Rfer_2818 Name: atuC Funciton: Geranyl-CoA carboxylase carboxyl transferase subunit Locus tag: Rfer_2817 Name: atuD Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: Rfer_2816 Name: atuE Funciton: Isohexenylglutaconyl-CoA hydratase Locus tag: Rfer_2815 Name: atuF Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: Rfer_2814 Name: Rfer_2814 Funciton: protein of unknown function DUF849
	Rfer_2818	atuC	Geranyl-CoA carboxylase carboxyl transferase subunit
	Rfer_2817	atuD	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
	Rfer_2816	atuE	Isohexenylglutaconyl-CoA hydratase
	Rfer_2815	atuF	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	Rfer_2814	Rfer_2814	protein of unknown function DUF849

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD