Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Sphingobium japonicum UT26S

Properties
Regulator type: Transcription factor
TF locus tag: SJA_C1-08440
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Sphingomonadales
Statistics of regulated genes:
- Genes 13
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 61 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -36
Score: 5.1
Sequence: GTTTCCCTTTTGTTC
Locus tag: SJA_C1-32440
Name: yoaA
Funciton: DinG family ATP-dependent helicase YoaA
yoaA
DinG family ATP-dependent helicase YoaA

Position: -64
Score: 0.8
Sequence: GAACAAATCTGGAAC
Locus tag: SJA_C1-11700
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrA
Excinuclease ABC subunit A

Position: -25
Score: 5
Sequence: GTTCTCTCTATGTTC
Locus tag: SJA_C1-17380
Name: PF04055
Funciton: Radical SAM domain protein
PF04055
Radical SAM domain protein

Position: -33
Score: 5.1
Sequence: GTTCTCCATCCGTTC
Locus tag: SJA_C1-08440
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -90
Score: 5.3
Sequence: GTTCCCCTCTTGTTC
Locus tag: SJA_C1-32810
Name: recA
Funciton: Recombinase A
recA
Recombinase A

Position: -19
Score: 0.3
Sequence: GAACAAATAGGGAAC
Locus tag: SJA_C1-11420
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: SJA_C1-11430
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: SJA_C1-11440
Name: dnaE2
Funciton: DNA polymerase III alpha chain
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha chain

Position: -30
Score: 5
Sequence: GTTCACCTTTCGTTC
Locus tag: SJA_C1-04020
Name: rmuC
Funciton: DNA recombination protein RmuC
rmuC
DNA recombination protein RmuC

Position: -27
Score: 5.2
Sequence: GTTCCCTTCATGTTC
Locus tag: SJA_C1-00110
Name: PF06319
Funciton: Conserved hypothetical protein
PF06319
Conserved hypothetical protein

Position: -30
Score: 5.3
Sequence: GTTCCTCATATGTTC
Locus tag: SJA_C1-10500
Name: radA
Funciton: DNA repair protein RadA
Locus tag: SJA_C1-10510
Name: cvpA
Funciton: Colicin V production protein
radA
DNA repair protein RadA
cvpA
Colicin V production protein

Position: -87
Score: 4.6
Sequence: ATTCGCCTTTTGTTC
Locus tag: SJA_C1-21470
Name: uvrD
Funciton: ATP-dependent DNA helicase II
uvrD
ATP-dependent DNA helicase II
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