Regulon of LexA in Sphingobium japonicum UT26S

Properties
Regulator type:	Transcription factor
TF locus tag:	SJA_C1-08440
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Sphingomonadales
Statistics of regulated genes:
- Genes	13
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 61 sites [see more]

Member of regulog collections

By taxonomy - Sphingomonadales
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -36 Score: 5.1 Sequence: GTTTCCCTTTTGTTC Locus tag: SJA_C1-32440 Name: yoaA Funciton: DinG family ATP-dependent helicase YoaA
	SJA_C1-32440	yoaA	DinG family ATP-dependent helicase YoaA
Position: -64 Score: 0.8 Sequence: GAACAAATCTGGAAC Locus tag: SJA_C1-11700 Name: uvrA Funciton: Excinuclease ABC subunit A
	SJA_C1-11700	uvrA	Excinuclease ABC subunit A
Position: -25 Score: 5 Sequence: GTTCTCTCTATGTTC Locus tag: SJA_C1-17380 Name: PF04055 Funciton: Radical SAM domain protein
	SJA_C1-17380	PF04055	Radical SAM domain protein
Position: -33 Score: 5.1 Sequence: GTTCTCCATCCGTTC Locus tag: SJA_C1-08440 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	SJA_C1-08440	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -90 Score: 5.3 Sequence: GTTCCCCTCTTGTTC Locus tag: SJA_C1-32810 Name: recA Funciton: Recombinase A
	SJA_C1-32810	recA	Recombinase A
Position: -19 Score: 0.3 Sequence: GAACAAATAGGGAAC Locus tag: SJA_C1-11420 Name: imuA Funciton: Predicted RecA/RadA recombinase Locus tag: SJA_C1-11430 Name: imuB Funciton: DNA polymerase-like protein PA0670 Locus tag: SJA_C1-11440 Name: dnaE2 Funciton: DNA polymerase III alpha chain
	SJA_C1-11420	imuA	Predicted RecA/RadA recombinase
	SJA_C1-11430	imuB	DNA polymerase-like protein PA0670
	SJA_C1-11440	dnaE2	DNA polymerase III alpha chain
Position: -30 Score: 5 Sequence: GTTCACCTTTCGTTC Locus tag: SJA_C1-04020 Name: rmuC Funciton: DNA recombination protein RmuC
	SJA_C1-04020	rmuC	DNA recombination protein RmuC
Position: -27 Score: 5.2 Sequence: GTTCCCTTCATGTTC Locus tag: SJA_C1-00110 Name: PF06319 Funciton: Conserved hypothetical protein
	SJA_C1-00110	PF06319	Conserved hypothetical protein
Position: -30 Score: 5.3 Sequence: GTTCCTCATATGTTC Locus tag: SJA_C1-10500 Name: radA Funciton: DNA repair protein RadA Locus tag: SJA_C1-10510 Name: cvpA Funciton: Colicin V production protein
	SJA_C1-10500	radA	DNA repair protein RadA
	SJA_C1-10510	cvpA	Colicin V production protein
Position: -87 Score: 4.6 Sequence: ATTCGCCTTTTGTTC Locus tag: SJA_C1-21470 Name: uvrD Funciton: ATP-dependent DNA helicase II
	SJA_C1-21470	uvrD	ATP-dependent DNA helicase II

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Sphingobium japonicum UT26S

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --