Regulon of LexA in Novosphingobium aromaticivorans DSM 12444

Properties
Regulator type:	Transcription factor
TF locus tag:	Saro_2029
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Sphingomonadales
Statistics of regulated genes:
- Genes	13
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 61 sites [see more]

Member of regulog collections

By taxonomy - Sphingomonadales
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -27 Score: 5 Sequence: GTTCCATTCCTGTTC Locus tag: Saro_2362 Name: yoaA Funciton: DinG family ATP-dependent helicase YoaA
	Saro_2362	yoaA	DinG family ATP-dependent helicase YoaA
Position: -274 Score: 5.1 Sequence: GTTCTTTATATGTTC Locus tag: Saro_2041 Name: COG3871 Funciton: General stress protein
	Saro_2041	COG3871	General stress protein
Position: -93 Score: 5.3 Sequence: GTTCCACATTCGTTC Locus tag: Saro_2029 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	Saro_2029	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -88 Score: 5.2 Sequence: GTTCCCCCCTTGTTC Locus tag: Saro_1275 Name: recA Funciton: Recombinase A
	Saro_1275	recA	Recombinase A
Position: -30 Score: 4.8 Sequence: GTTCCCATTTCGTTC Locus tag: Saro_2898 Name: rmuC Funciton: DNA recombination protein RmuC
	Saro_2898	rmuC	DNA recombination protein RmuC
Position: -17 Score: 0.9 Sequence: GAACATAATAGGAAC Locus tag: Saro_1536 Name: imuA Funciton: Predicted RecA/RadA recombinase Locus tag: Saro_1537 Name: imuB Funciton: DNA polymerase-like protein PA0670 Locus tag: Saro_1538 Name: dnaE2 Funciton: DNA polymerase III alpha chain
	Saro_1536	imuA	Predicted RecA/RadA recombinase
	Saro_1537	imuB	DNA polymerase-like protein PA0670
	Saro_1538	dnaE2	DNA polymerase III alpha chain
Position: -31 Score: 5.2 Sequence: GTTCCAGATTTGTTC Locus tag: Saro_1956 Name: radA Funciton: DNA repair protein RadA Locus tag: Saro_1955 Name: cvpA Funciton: Colicin V production protein
	Saro_1956	radA	DNA repair protein RadA
	Saro_1955	cvpA	Colicin V production protein
Position: -28 Score: 4.2 Sequence: GTTCAGCGTTTGTTC Locus tag: Saro_0242 Name: PF06319 Funciton: Conserved hypothetical protein
	Saro_0242	PF06319	Conserved hypothetical protein
Position: -19 Score: 4.9 Sequence: GGTCCCTATCTGTTC Locus tag: Saro_1293 Name: uvrD Funciton: ATP-dependent DNA helicase II
	Saro_1293	uvrD	ATP-dependent DNA helicase II
Position: -25 Score: 0.7 Sequence: GAACATATATGGAAC Locus tag: Saro_1192 Name: uvrA Funciton: Excinuclease ABC subunit A
	Saro_1192	uvrA	Excinuclease ABC subunit A

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Novosphingobium aromaticivorans DSM 12444

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --