Regulon of LexA in Novosphingobium aromaticivorans DSM 12444
| Regulator type: | Transcription factor |
| TF locus tag: | Saro_2029 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Sphingomonadales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Sphingomonadales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -27
Score: 5 Sequence: GTTCCATTCCTGTTC
Locus tag: Saro_2362
Name: yoaA Funciton: DinG family ATP-dependent helicase YoaA |
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yoaA
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DinG family ATP-dependent helicase YoaA
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Position: -274
Score: 5.1 Sequence: GTTCTTTATATGTTC
Locus tag: Saro_2041
Name: COG3871 Funciton: General stress protein |
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COG3871
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General stress protein
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Position: -93
Score: 5.3 Sequence: GTTCCACATTCGTTC
Locus tag: Saro_2029
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -88
Score: 5.2 Sequence: GTTCCCCCCTTGTTC
Locus tag: Saro_1275
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -30
Score: 4.8 Sequence: GTTCCCATTTCGTTC
Locus tag: Saro_2898
Name: rmuC Funciton: DNA recombination protein RmuC |
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rmuC
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DNA recombination protein RmuC
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Position: -17
Score: 0.9 Sequence: GAACATAATAGGAAC
Locus tag: Saro_1536
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: Saro_1537
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: Saro_1538
Name: dnaE2 Funciton: DNA polymerase III alpha chain |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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DNA polymerase III alpha chain
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Position: -31
Score: 5.2 Sequence: GTTCCAGATTTGTTC
Locus tag: Saro_1956
Name: radA Funciton: DNA repair protein RadA
Locus tag: Saro_1955
Name: cvpA Funciton: Colicin V production protein |
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radA
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DNA repair protein RadA
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cvpA
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Colicin V production protein
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Position: -28
Score: 4.2 Sequence: GTTCAGCGTTTGTTC
Locus tag: Saro_0242
Name: PF06319 Funciton: Conserved hypothetical protein |
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PF06319
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Conserved hypothetical protein
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Position: -19
Score: 4.9 Sequence: GGTCCCTATCTGTTC
Locus tag: Saro_1293
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -25
Score: 0.7 Sequence: GAACATATATGGAAC
Locus tag: Saro_1192
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |