Regulon of LexA in Erythrobacter sp. NAP1
| Regulator type: | Transcription factor |
| TF locus tag: | NAP1_05785 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Sphingomonadales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Sphingomonadales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -128
Score: 4.7 Sequence: GTTCCTAATATGTTC
Locus tag: NAP1_04570
Name: COG3871 Funciton: General stress protein |
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COG3871
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General stress protein
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Position: -158
Score: 5.3 Sequence: GTTCCACATTCGTTC
Locus tag: NAP1_05785
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -20
Score: 5.1 Sequence: GTTCTTTATATGTTC
Locus tag: NAP1_06190
Name: PF04055 Funciton: Radical SAM domain protein |
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PF04055
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Radical SAM domain protein
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Position: -77
Score: 5.2 Sequence: GTTCCACAAATGTTC
Locus tag: NAP1_05385
Name: radA Funciton: DNA repair protein RadA
Locus tag: NAP1_05390
Name: cvpA Funciton: Colicin V production protein |
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radA
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DNA repair protein RadA
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cvpA
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Colicin V production protein
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Position: -5
Score: 4.9 Sequence: GTTCCATGTATGTTC
Locus tag: NAP1_01345
Name: rmuC Funciton: DNA recombination protein RmuC |
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rmuC
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DNA recombination protein RmuC
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Position: -148
Score: 0.7 Sequence: GAACATATTAGGAAC
Locus tag: NAP1_04575
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: NAP1_04580
Name: null Funciton: hypothetical protein |
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imuA
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Predicted RecA/RadA recombinase
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hypothetical protein
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Position: -126
Score: 5 Sequence: GTTCTACTCTTGTTC
Locus tag: NAP1_06995
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -27
Score: 4.9 Sequence: GTTCGCTCTATGTTC
Locus tag: NAP1_13438
Name: PF06319 Funciton: Conserved hypothetical protein |
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PF06319
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Conserved hypothetical protein
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Position: -39
Score: 5.3 Sequence: GTTCCCTACCTGTTC
Locus tag: NAP1_06915
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -64
Score: 0.6 Sequence: GAACATTTGCGGAAC
Locus tag: NAP1_07150
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |