Regulon of LexA in Xanthobacter autotrophicus Py2

Properties
Regulator type:	Transcription factor
TF locus tag:	Xaut_4371
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Rhizobiales
Statistics of regulated genes:
- Genes	14
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 212 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -18 Score: 0.7 Sequence: GAACAAAAGAGGAAC Locus tag: Xaut_3470 Name: imuA Funciton: Predicted RecA/RadA recombinase Locus tag: Xaut_3469 Name: imuB Funciton: DNA polymerase-like protein PA0670 Locus tag: Xaut_3468 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	Xaut_3470	imuA	Predicted RecA/RadA recombinase
	Xaut_3469	imuB	DNA polymerase-like protein PA0670
	Xaut_3468	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -252 Score: 1.2 Sequence: GAACATATCAGGAAC Position: -151 Score: 1.7 Sequence: GAACACATCATGAAC Locus tag: Xaut_4316 Name: ssb Funciton: Single-stranded DNA-binding protein
	Xaut_4316	ssb	Single-stranded DNA-binding protein
Position: -77 Score: 1.1 Sequence: GAACACAAAAGGAAC Position: -51 Score: 5.2 Sequence: GTTCATGATTTGTTT Locus tag: Xaut_4371 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	Xaut_4371	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -291 Score: 5.2 Sequence: GTTCCTGATATGTTC Locus tag: Xaut_4315 Name: uvrA Funciton: Excinuclease ABC subunit A
	Xaut_4315	uvrA	Excinuclease ABC subunit A
Position: -40 Score: 5.4 Sequence: GTTCTTGTTTCGTTC Locus tag: Xaut_1946 Name: PF04055 Funciton: Radical SAM domain protein
	Xaut_1946	PF04055	Radical SAM domain protein
Position: -63 Score: 0.8 Sequence: GAACAAATAAAGAAC Locus tag: Xaut_0810 Name: imuA Funciton: Predicted RecA/RadA recombinase Locus tag: Xaut_0809 Name: imuB Funciton: DNA polymerase-like protein PA0670 Locus tag: Xaut_0808 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	Xaut_0810	imuA	Predicted RecA/RadA recombinase
	Xaut_0809	imuB	DNA polymerase-like protein PA0670
	Xaut_0808	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -80 Score: 1.6 Sequence: GAACATATTGCGAAC Position: -62 Score: 1.6 Sequence: GAACAAAGCATGTAC Locus tag: Xaut_4080 Name: recA Funciton: Recombinase A
	Xaut_4080	recA	Recombinase A
Position: -108 Score: 4.6 Sequence: GTTTCCGTTCTGTTC Locus tag: Xaut_4757 Name: parE Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
	Xaut_4757	parE	Topoisomerase IV subunit B (EC 5.99.1.-)
Position: -75 Score: 4.8 Sequence: GTTCCGCTTTCGTTC Locus tag: Xaut_0335 Name: yifB Funciton: Conserved hypothetical protein
	Xaut_0335	yifB	Conserved hypothetical protein
Position: -42 Score: 4.9 Sequence: GTTCGCTGTTTGTTC Locus tag: Xaut_3306 Name: rmuC Funciton: DNA recombination protein RmuC
	Xaut_3306	rmuC	DNA recombination protein RmuC

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Xanthobacter autotrophicus Py2

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --