Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Rhodopseudomonas palustris CGA009

Properties
Regulator type: Transcription factor
TF locus tag: RPA2903
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Rhizobiales
Statistics of regulated genes:
- Genes 17
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 212 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -76
Score: 1.8
Sequence: GAACATATCATGAAC
Locus tag: RPA1801
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: RPA1802
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: RPA1803
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: 6
Score: 5.2
Sequence: GTTCATGATTTGTTT
Locus tag: RPA2903
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -97
Score: 5.1
Sequence: GTTCTTCCTATGTTC
Locus tag: RPA2816
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrA
Excinuclease ABC subunit A

Position: -38
Score: 5.7
Sequence: GTTCTTGATTTGTTC
Locus tag: RPA1033
Name: PF04055
Funciton: Radical SAM domain protein
PF04055
Radical SAM domain protein

Position: -53
Score: 0.4
Sequence: GAACAAAGCAGGAAT
Locus tag: RPA2802
Name: uvrD2
Funciton: ATP-dependent DNA helicase II
uvrD2
ATP-dependent DNA helicase II

Position: -54
Score: 1.6
Sequence: GAACAAAATGTGAAC
Locus tag: RPA3089
Name: radA
Funciton: DNA repair protein RadA
radA
DNA repair protein RadA

Position: -102
Score: 1.6
Sequence: GAACATATTGCGAAC
Position: -84
Score: 0.7
Sequence: GAACAAATGGGGTAC
Locus tag: RPA3851
Name: recA
Funciton: Recombinase A
recA
Recombinase A

Position: -63
Score: 4.5
Sequence: GTTCTTGAAACGTTC
Locus tag: RPA4380
Name: rna
Funciton: Ribonuclease T2
rna
Ribonuclease T2

Position: -44
Score: 4.5
Sequence: GTTGCTATTTTGTTC
Locus tag: RPA1099
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: RPA1100
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: RPA1101
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: RPA1102
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvA
Holliday junction DNA helicase RuvA
cdd
Cytidine deaminase (EC 3.5.4.5)
ruvB
Holliday junction DNA helicase RuvB

Position: -67
Score: 4.4
Sequence: GTTCACTTAATGTTC
Locus tag: RPA0318
Name: yifB
Funciton: Conserved hypothetical protein
yifB
Conserved hypothetical protein

Position: -18
Score: 4.8
Sequence: GTTCTATCTTCGTTC
Locus tag: RPA0620
Name: rmuC
Funciton: DNA recombination protein RmuC
rmuC
DNA recombination protein RmuC

Position: -229
Score: 1.1
Sequence: GAACAAAAATAGAAC
Locus tag: RPA2814
Name: ssb
Funciton: Single-stranded DNA-binding protein
ssb
Single-stranded DNA-binding protein
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD