Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Mesorhizobium sp. BNC1

Properties
Regulator type: Transcription factor
TF locus tag: Meso_1642
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Rhizobiales
Statistics of regulated genes:
- Genes 19
- Operons 15
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 212 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -38
Score: 4.9
Sequence: GTTCTGGGTTTGTTT
Locus tag: Meso_1642
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
Meso_1642
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -175
Score: 5.2
Sequence: GTTCGTTCTTTGTTC
Locus tag: Meso_1396
Name: uvrA
Funciton: Excinuclease ABC subunit A
Meso_1396
uvrA
Excinuclease ABC subunit A
Position: -77
Score: 5.7
Sequence: GTTCTTGATTTGTTC
Locus tag: Meso_0704
Name: PF04055
Funciton: Radical SAM domain protein
Meso_0704
PF04055
Radical SAM domain protein
Position: -171
Score: 0.9
Sequence: GAACAAAAAAGGAAC
Locus tag: Meso_1397
Name: ssb
Funciton: Single-stranded DNA-binding protein
Meso_1397
ssb
Single-stranded DNA-binding protein
Position: -88
Score: 0.7
Sequence: GAACGGAACCGGAAC
Locus tag: Meso_1015
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Meso_1015
parE
Topoisomerase IV subunit B (EC 5.99.1.-)
Position: -54
Score: 0.4
Sequence: GTACAAAAAGAAAAC
Locus tag: Meso_1988
Name: uvrD
Funciton: ATP-dependent DNA helicase II
Meso_1988
uvrD
ATP-dependent DNA helicase II
Position: -51
Score: 5
Sequence: GTTCACGATTTGATC
Locus tag: Meso_0418
Name: rmuC
Funciton: DNA recombination protein RmuC
Meso_0418
rmuC
DNA recombination protein RmuC
Position: -175
Score: 0.4
Sequence: GAACAAAAACAGAAT
Locus tag: Meso_3376
Name: mgpS
Funciton: ATP-dependent helicase
Meso_3376
mgpS
ATP-dependent helicase
Position: -52
Score: 0.4
Sequence: GAACAAATAGAGAAC
Locus tag: Meso_3807
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: Meso_3808
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: Meso_3809
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
Meso_3807
imuA
Predicted RecA/RadA recombinase
Meso_3808
imuB
DNA polymerase-like protein PA0670
Meso_3809
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -140
Score: 0.6
Sequence: AAACAAAAAACGAAC
Position: -73
Score: 0.9
Sequence: GAACAAAACGGGTAC
Locus tag: Meso_1263
Name: recA
Funciton: Recombinase A
Meso_1263
recA
Recombinase A
Position: -30
Score: 1.2
Sequence: GAACATAACAGGAAC
Locus tag: Meso_3265
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: Meso_3264
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: Meso_3263
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
Meso_3265
imuA
Predicted RecA/RadA recombinase
Meso_3264
imuB
DNA polymerase-like protein PA0670
Meso_3263
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -17
Score: 4.5
Sequence: GTTCTGGATTCGTGC
Locus tag: Meso_1686
Name: xthA
Funciton: Exodeoxyribonuclease III (EC 3.1.11.2)
Meso_1686
xthA
Exodeoxyribonuclease III (EC 3.1.11.2)
Position: -58
Score: 4.3
Sequence: GTTTTCTTTTTGTGT
Locus tag: Meso_2118
Name: greA
Funciton: Transcription elongation factor GreA
Meso_2118
greA
Transcription elongation factor GreA
Position: -27
Score: 5.3
Sequence: GTTCTTCTTATGTTC
Locus tag: Meso_1344
Name: dinP
Funciton: DNA polymerase IV (EC 2.7.7.7)
Meso_1344
dinP
DNA polymerase IV (EC 2.7.7.7)
Position: -77
Score: 4.9
Sequence: GTTCTTGATCTGATC
Locus tag: Meso_3583
Name: yifB
Funciton: Conserved hypothetical protein
Meso_3583
yifB
Conserved hypothetical protein
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