Regulon of LexA in Mesorhizobium sp. BNC1
| Regulator type: | Transcription factor |
| TF locus tag: | Meso_1642 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 19 |
| - Operons | 15 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -38
Score: 4.9 Sequence: GTTCTGGGTTTGTTT
Locus tag: Meso_1642
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -175
Score: 5.2 Sequence: GTTCGTTCTTTGTTC
Locus tag: Meso_1396
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: -77
Score: 5.7 Sequence: GTTCTTGATTTGTTC
Locus tag: Meso_0704
Name: PF04055 Funciton: Radical SAM domain protein |
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PF04055
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Radical SAM domain protein
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Position: -171
Score: 0.9 Sequence: GAACAAAAAAGGAAC
Locus tag: Meso_1397
Name: ssb Funciton: Single-stranded DNA-binding protein |
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ssb
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Single-stranded DNA-binding protein
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Position: -88
Score: 0.7 Sequence: GAACGGAACCGGAAC
Locus tag: Meso_1015
Name: parE Funciton: Topoisomerase IV subunit B (EC 5.99.1.-) |
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parE
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Topoisomerase IV subunit B (EC 5.99.1.-)
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Position: -54
Score: 0.4 Sequence: GTACAAAAAGAAAAC
Locus tag: Meso_1988
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -51
Score: 5 Sequence: GTTCACGATTTGATC
Locus tag: Meso_0418
Name: rmuC Funciton: DNA recombination protein RmuC |
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rmuC
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DNA recombination protein RmuC
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Position: -175
Score: 0.4 Sequence: GAACAAAAACAGAAT
Locus tag: Meso_3376
Name: mgpS Funciton: ATP-dependent helicase |
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mgpS
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ATP-dependent helicase
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Position: -52
Score: 0.4 Sequence: GAACAAATAGAGAAC
Locus tag: Meso_3807
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: Meso_3808
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: Meso_3809
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -140
Score: 0.6 Sequence: AAACAAAAAACGAAC
Position: -73
Score: 0.9 Sequence: GAACAAAACGGGTAC
Locus tag: Meso_1263
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -30
Score: 1.2 Sequence: GAACATAACAGGAAC
Locus tag: Meso_3265
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: Meso_3264
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: Meso_3263
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -17
Score: 4.5 Sequence: GTTCTGGATTCGTGC
Locus tag: Meso_1686
Name: xthA Funciton: Exodeoxyribonuclease III (EC 3.1.11.2) |
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xthA
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Exodeoxyribonuclease III (EC 3.1.11.2)
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Position: -58
Score: 4.3 Sequence: GTTTTCTTTTTGTGT
Locus tag: Meso_2118
Name: greA Funciton: Transcription elongation factor GreA |
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greA
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Transcription elongation factor GreA
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Position: -27
Score: 5.3 Sequence: GTTCTTCTTATGTTC
Locus tag: Meso_1344
Name: dinP Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinP
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DNA polymerase IV (EC 2.7.7.7)
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Position: -77
Score: 4.9 Sequence: GTTCTTGATCTGATC
Locus tag: Meso_3583
Name: yifB Funciton: Conserved hypothetical protein |
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yifB
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Conserved hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |