Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Rhizobium etli CFN 42

Properties
Regulator type: Transcription factor
TF locus tag: RHE_CH01928
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Rhizobiales
Statistics of regulated genes:
- Genes 22
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 212 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -84
Score: 5.2
Sequence: GTTCTGGATTTGTTT
Locus tag: RHE_CH01928
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -139
Score: 5.6
Sequence: GTTCTTTATTTGTTC
Locus tag: RHE_CH02107
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrA
Excinuclease ABC subunit A

Position: -85
Score: 5.1
Sequence: GTTCTTGCATTGTTC
Locus tag: RHE_CH00869
Name: PF04055
Funciton: Radical SAM domain protein
PF04055
Radical SAM domain protein

Position: -63
Score: 1.5
Sequence: GAACATTCAAGGAAC
Locus tag: RHE_CH00573
Name: uvrD2
Funciton: ATP-dependent DNA helicase II
uvrD2
ATP-dependent DNA helicase II

Position: -109
Score: 0
Sequence: GAATGAAAGCAGAAC
Locus tag: RHE_CH02819
Name: uvrD
Funciton: ATP-dependent DNA helicase II
uvrD
ATP-dependent DNA helicase II

Position: -244
Score: 0.9
Sequence: GAACAAAAGCTGAAT
Locus tag: RHE_CH04022
Name: mgpS
Funciton: ATP-dependent helicase
mgpS
ATP-dependent helicase

Position: -253
Score: 1.1
Sequence: GAACAAACATGGAAC
Locus tag: RHE_CH01627
Name: dnaE
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
dnaE
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -59
Score: 0.8
Sequence: GAACAAATAAAGAAC
Locus tag: RHE_PF00150
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: RHE_PF00151
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: RHE_PF00152
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -130
Score: 0.4
Sequence: AAACAAATGTAGAAC
Position: -62
Score: 0.7
Sequence: GAACAAATGGGGTAC
Locus tag: RHE_CH02323
Name: recA
Funciton: Recombinase A
recA
Recombinase A

Position: -37
Score: 1.2
Sequence: GAACATAACAGGAAC
Locus tag: RHE_CH04085
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: RHE_CH04084
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: RHE_CH04083
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -246
Score: 4.9
Sequence: GTTCACTATATGTTC
Locus tag: RHE_CH02969
Name: greA
Funciton: Transcription elongation factor GreA
greA
Transcription elongation factor GreA

Position: -162
Score: 4.5
Sequence: GTTTCCCTTTTGTAC
Locus tag: RHE_CH02563
Name: uvrB
Funciton: Excinuclease ABC subunit B
uvrB
Excinuclease ABC subunit B

Position: -31
Score: 4.9
Sequence: GTTCCTGCATTGTTC
Locus tag: RHE_CH02874
Name: rna
Funciton: Ribonuclease T2
rna
Ribonuclease T2

Position: -20
Score: 5
Sequence: GTTCAACCTTTGTTC
Locus tag: RHE_CH01629
Name: dinP
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinP
DNA polymerase IV (EC 2.7.7.7)

Position: -160
Score: 0.8
Sequence: GAACAAATAAAGAAC
Locus tag: RHE_CH02108
Name: ssb
Funciton: Single-stranded DNA-binding protein
ssb
Single-stranded DNA-binding protein

Position: -59
Score: 5.4
Sequence: GTTTTTGTTTTGTTC
Locus tag: RHE_CH03478
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)

Position: -94
Score: 5
Sequence: GTTCTTGTTTTATTC
Locus tag: RHE_CH00323
Name: yifB
Funciton: Conserved hypothetical protein
yifB
Conserved hypothetical protein

Position: -235
Score: 5
Sequence: GTTCACGTTTTGATC
Locus tag: RHE_CH00410
Name: rmuC
Funciton: DNA recombination protein RmuC
rmuC
DNA recombination protein RmuC
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