Regulon of LexA in Rhizobium etli CFN 42

Properties
Regulator type:	Transcription factor
TF locus tag:	RHE_CH01928
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Rhizobiales
Statistics of regulated genes:
- Genes	22
- Operons	18
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 212 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -84 Score: 5.2 Sequence: GTTCTGGATTTGTTT Locus tag: RHE_CH01928 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	RHE_CH01928	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -139 Score: 5.6 Sequence: GTTCTTTATTTGTTC Locus tag: RHE_CH02107 Name: uvrA Funciton: Excinuclease ABC subunit A
	RHE_CH02107	uvrA	Excinuclease ABC subunit A
Position: -85 Score: 5.1 Sequence: GTTCTTGCATTGTTC Locus tag: RHE_CH00869 Name: PF04055 Funciton: Radical SAM domain protein
	RHE_CH00869	PF04055	Radical SAM domain protein
Position: -63 Score: 1.5 Sequence: GAACATTCAAGGAAC Locus tag: RHE_CH00573 Name: uvrD2 Funciton: ATP-dependent DNA helicase II
	RHE_CH00573	uvrD2	ATP-dependent DNA helicase II
Position: -109 Score: 0 Sequence: GAATGAAAGCAGAAC Locus tag: RHE_CH02819 Name: uvrD Funciton: ATP-dependent DNA helicase II
	RHE_CH02819	uvrD	ATP-dependent DNA helicase II
Position: -244 Score: 0.9 Sequence: GAACAAAAGCTGAAT Locus tag: RHE_CH04022 Name: mgpS Funciton: ATP-dependent helicase
	RHE_CH04022	mgpS	ATP-dependent helicase
Position: -253 Score: 1.1 Sequence: GAACAAACATGGAAC Locus tag: RHE_CH01627 Name: dnaE Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	RHE_CH01627	dnaE	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -59 Score: 0.8 Sequence: GAACAAATAAAGAAC Locus tag: RHE_PF00150 Name: imuA Funciton: Predicted RecA/RadA recombinase Locus tag: RHE_PF00151 Name: imuB Funciton: DNA polymerase-like protein PA0670 Locus tag: RHE_PF00152 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	RHE_PF00150	imuA	Predicted RecA/RadA recombinase
	RHE_PF00151	imuB	DNA polymerase-like protein PA0670
	RHE_PF00152	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -130 Score: 0.4 Sequence: AAACAAATGTAGAAC Position: -62 Score: 0.7 Sequence: GAACAAATGGGGTAC Locus tag: RHE_CH02323 Name: recA Funciton: Recombinase A
	RHE_CH02323	recA	Recombinase A
Position: -37 Score: 1.2 Sequence: GAACATAACAGGAAC Locus tag: RHE_CH04085 Name: imuA Funciton: Predicted RecA/RadA recombinase Locus tag: RHE_CH04084 Name: imuB Funciton: DNA polymerase-like protein PA0670 Locus tag: RHE_CH04083 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	RHE_CH04085	imuA	Predicted RecA/RadA recombinase
	RHE_CH04084	imuB	DNA polymerase-like protein PA0670
	RHE_CH04083	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -246 Score: 4.9 Sequence: GTTCACTATATGTTC Locus tag: RHE_CH02969 Name: greA Funciton: Transcription elongation factor GreA
	RHE_CH02969	greA	Transcription elongation factor GreA
Position: -162 Score: 4.5 Sequence: GTTTCCCTTTTGTAC Locus tag: RHE_CH02563 Name: uvrB Funciton: Excinuclease ABC subunit B
	RHE_CH02563	uvrB	Excinuclease ABC subunit B
Position: -31 Score: 4.9 Sequence: GTTCCTGCATTGTTC Locus tag: RHE_CH02874 Name: rna Funciton: Ribonuclease T2
	RHE_CH02874	rna	Ribonuclease T2
Position: -20 Score: 5 Sequence: GTTCAACCTTTGTTC Locus tag: RHE_CH01629 Name: dinP Funciton: DNA polymerase IV (EC 2.7.7.7)
	RHE_CH01629	dinP	DNA polymerase IV (EC 2.7.7.7)
Position: -160 Score: 0.8 Sequence: GAACAAATAAAGAAC Locus tag: RHE_CH02108 Name: ssb Funciton: Single-stranded DNA-binding protein
	RHE_CH02108	ssb	Single-stranded DNA-binding protein
Position: -59 Score: 5.4 Sequence: GTTTTTGTTTTGTTC Locus tag: RHE_CH03478 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	RHE_CH03478	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Position: -94 Score: 5 Sequence: GTTCTTGTTTTATTC Locus tag: RHE_CH00323 Name: yifB Funciton: Conserved hypothetical protein
	RHE_CH00323	yifB	Conserved hypothetical protein
Position: -235 Score: 5 Sequence: GTTCACGTTTTGATC Locus tag: RHE_CH00410 Name: rmuC Funciton: DNA recombination protein RmuC
	RHE_CH00410	rmuC	DNA recombination protein RmuC

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Rhizobium etli CFN 42

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --