Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Burkholderia phymatum STM815

Properties
Regulator type: Transcription factor
TF locus tag: Bphy_1630
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Burkholderia
Statistics of regulated genes:
- Genes 12
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 75 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -25
Score: 6.3
Sequence: CACTGTATATTTGTACAGTA
Locus tag: Bphy_0767
Name: PF04055
Funciton: DNA repair photolyase
PF04055
DNA repair photolyase

Position: -44
Score: 6.2
Sequence: TACTGTATGTTTGTACAGTA
Locus tag: Bphy_4157
Name: PF10616
Funciton: Protein of unknown function DUF2471
Locus tag: Bphy_4156
Name: PF00589
Funciton: Predicted integrase/recombinase
PF10616
Protein of unknown function DUF2471
PF00589
Predicted integrase/recombinase

Position: -73
Score: 6.3
Sequence: AACTGTATAAACATACAGTA
Locus tag: Bphy_1549
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrA
Excinuclease ABC subunit A

Position: -45
Score: 5.7
Sequence: TACTGTATAAAAATACAGGC
Position: -25
Score: 5.4
Sequence: ACCTGTCTATCCATACAGTG
Locus tag: Bphy_1630
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -121
Score: 6
Sequence: TACTGTTTTTTTATACAGTG
Locus tag: Bphy_0440
Name: recA
Funciton: Recombinase A
Locus tag: Bphy_0441
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -34
Score: 6.4
Sequence: TACTGTATAAATATACAGTT
Locus tag: Bphy_1972
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: Bphy_1971
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: Bphy_1970
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -37
Score: 5.6
Sequence: GGCTGTATAAATATACAGTT
Locus tag: Bphy_5308
Name: PF08774
Funciton: Hypothetical protein, restriction endonuclease-like VRR-NUC domain
Locus tag: Bphy_5309
Name: PF06733
Funciton: DinG family ATP-dependent helicase CPE1197
PF08774
Hypothetical protein, restriction endonuclease-like VRR-NUC domain
PF06733
DinG family ATP-dependent helicase CPE1197
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