Regulon of LexA in Aeromonas hydrophila subsp. hydrophila ATCC 7966

Properties
Regulator type:	Transcription factor
TF locus tag:	AHA_0183
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Psychromonadaceae/Aeromonadales
Statistics of regulated genes:
- Genes	13
- Operons	11
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 77 sites [see more]

Member of regulog collections

By taxonomy - Psychromonadaceae/Aeromonadales
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -68 Score: 5.9 Sequence: TACTGTATGAATAGACAGTA Locus tag: AHA_3716 Name: recA Funciton: Recombinase A Locus tag: AHA_3715 Name: recX Funciton: Regulatory protein RecX
	AHA_3716	recA	Recombinase A
	AHA_3715	recX	Regulatory protein RecX
Position: -72 Score: 5.2 Sequence: ACCTGTCTATTCATCCAGTA Locus tag: AHA_3955 Name: uvrA Funciton: Excinuclease ABC subunit A
	AHA_3955	uvrA	Excinuclease ABC subunit A
Position: -74 Score: 5.1 Sequence: TGCTGGATACTTATCCAGTT Locus tag: AHA_3648 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: AHA_3647 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	AHA_3648	ruvA	Holliday junction DNA helicase RuvA
	AHA_3647	ruvB	Holliday junction DNA helicase RuvB
Position: -35 Score: 5 Sequence: ATCTGGACATATTTACAGTG Locus tag: AHA_0284 Name: recG Funciton: ATP-dependent DNA helicase RecG (EC 3.6.1.-)
	AHA_0284	recG	ATP-dependent DNA helicase RecG (EC 3.6.1.-)
Position: -34 Score: 5.8 Sequence: TACTGTTCACATATACAGTA Locus tag: AHA_4047 Name: topB Funciton: DNA topoisomerase III (EC 5.99.1.2)
	AHA_4047	topB	DNA topoisomerase III (EC 5.99.1.2)
Position: -49 Score: 5.3 Sequence: CACTGTATATACTGCCAGTG Position: -29 Score: 5.3 Sequence: TGCTGTATAAAAAGACAGGT Locus tag: AHA_0183 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	AHA_0183	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -52 Score: 4.8 Sequence: CACTGTATGAACGTACAATA Locus tag: AHA_2107 Name: polB Funciton: DNA polymerase II (EC 2.7.7.7)
	AHA_2107	polB	DNA polymerase II (EC 2.7.7.7)
Position: -26 Score: 5.4 Sequence: GCCTGTATAAATAAACAGGA Locus tag: AHA_0220 Name: uvrD Funciton: ATP-dependent DNA helicase II
	AHA_0220	uvrD	ATP-dependent DNA helicase II
Position: -67 Score: 5.6 Sequence: TACTGTATGGAAAACCAGTA Position: -45 Score: 5.8 Sequence: TACTGGATACATACACAGTA Locus tag: AHA_2986 Name: recN Funciton: DNA repair protein RecN
	AHA_2986	recN	DNA repair protein RecN
Position: -53 Score: 4.7 Sequence: TACTGTATATCCATACATAT Locus tag: AHA_2277 Name: yebG Funciton: SOS regulon DNA damage-inducible protein
	AHA_2277	yebG	SOS regulon DNA damage-inducible protein
Position: -22 Score: 4.9 Sequence: ACCTGTTTATTCGTACAGTG Locus tag: AHA_1145 Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7)
	AHA_1145	dinB	DNA polymerase IV (EC 2.7.7.7)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Aeromonas hydrophila subsp. hydrophila ATCC 7966

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --