Regulon of LexA in Moritella sp. PE36
| Regulator type: | Transcription factor |
| TF locus tag: | PE36_16374 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Psychromonadaceae/Aeromonadales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 12 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -50
Score: 5.2 Sequence: TACTGTATATAATTACAAGA
Position: -30
Score: 5.9 Sequence: AACTGTATATAAAACCAGTT
Locus tag: PE36_16374
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -50
Score: 4.8 Sequence: AACTGGTCTTTTATACAGTG
Locus tag: PE36_21990
Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinB
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DNA polymerase IV (EC 2.7.7.7)
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Position: -35
Score: 5.4 Sequence: ATATGTTTATATATACAGTA
Locus tag: PE36_16064
Name: recG Funciton: ATP-dependent DNA helicase RecG (EC 3.6.1.-) |
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recG
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ATP-dependent DNA helicase RecG (EC 3.6.1.-)
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Position: -65
Score: 5.4 Sequence: AACTGTATATACATCCAGAT
Locus tag: PE36_11322
Name: radA Funciton: DNA repair protein RadA |
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radA
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DNA repair protein RadA
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Position: -68
Score: 5.5 Sequence: TACTGTATGAACGAACAGTA
Locus tag: PE36_23016
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -36
Score: 5.5 Sequence: AACTGTTTATTCATACAGTC
Locus tag: PE36_16620
Name: topB Funciton: DNA topoisomerase III (EC 5.99.1.2) |
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topB
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DNA topoisomerase III (EC 5.99.1.2)
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Position: -74
Score: 5.3 Sequence: ATCTGGATATTTAACCAGTA
Locus tag: PE36_02589
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: PE36_02584
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -38
Score: 4.8 Sequence: CACTGTCATAATATACAGTG
Locus tag: PE36_11847
Name: yebG Funciton: SOS regulon DNA damage-inducible protein |
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yebG
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SOS regulon DNA damage-inducible protein
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Position: -35
Score: 5.6 Sequence: TACTGATTAAATATACAGTC
Locus tag: PE36_15844
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -42
Score: 5.5 Sequence: TACTGTATATAAAACCAGGC
Position: -25
Score: 4.2 Sequence: GGCTGATAAAATAAACAGGA
Locus tag: PE36_05748
Name: recN Funciton: DNA repair protein RecN |
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recN
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DNA repair protein RecN
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Position: -45
Score: 4.8 Sequence: TGCTGTACACTTAACCAGTC
Locus tag: PE36_19455
Name: polB Funciton: DNA polymerase II (EC 2.7.7.7) |
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polB
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DNA polymerase II (EC 2.7.7.7)
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Position: -37
Score: 5.4 Sequence: TACTGTATGTATAACCACTG
Position: -22
Score: 4.7 Sequence: CACTGGATATGCAAACAGGC
Locus tag: PE36_14089
Name: SSF52540 Funciton: hypothetical protein, P-loop containing nucleoside triphosphate hydrolase family |
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SSF52540
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hypothetical protein, P-loop containing nucleoside triphosphate hydrolase family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |