Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Psychromonas sp. CNPT3

Properties
Regulator type: Transcription factor
TF locus tag: PCNPT3_02010
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Psychromonadaceae/Aeromonadales
Statistics of regulated genes:
- Genes 13
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 77 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -52
Score: 4.5
Sequence: CCATGTATAGATATACACTG
Position: -37
Score: 5.6
Sequence: CACTGTCTATATTAACAGTT
Locus tag: PCNPT3_02010
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
PCNPT3_02010
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -43
Score: 5.6
Sequence: TACTGTTCATAATAACAGTA
Locus tag: PCNPT3_07113
Name: null
Funciton: Regulatory protein RecX
Locus tag: PCNPT3_07108
Name: radA
Funciton: DNA repair protein RadA
PCNPT3_07113
Regulatory protein RecX
PCNPT3_07108
radA
DNA repair protein RadA
Position: -65
Score: 5.6
Sequence: TACTGTATGAATAGTCAGTA
Position: -45
Score: 5.4
Sequence: AACTGATCATATAAACAGTA
Locus tag: PCNPT3_13378
Name: recA
Funciton: Recombinase A
PCNPT3_13378
recA
Recombinase A
Position: -55
Score: 6
Sequence: TACTGTATATATAATCAGTT
Locus tag: PCNPT3_05579
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
PCNPT3_05579
dinB
DNA polymerase IV (EC 2.7.7.7)
Position: -76
Score: 6
Sequence: TACTGTCTATATAAACAGTT
Locus tag: PCNPT3_08640
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
PCNPT3_08640
topB
DNA topoisomerase III (EC 5.99.1.2)
Position: -64
Score: 5.2
Sequence: CACTGGATATAAAGTCAGTT
Locus tag: PCNPT3_11040
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: PCNPT3_11035
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
PCNPT3_11040
ruvA
Holliday junction DNA helicase RuvA
PCNPT3_11035
ruvB
Holliday junction DNA helicase RuvB
Position: 74
Score: 5.3
Sequence: TACTGTATATAAAACCATGA
Locus tag: PCNPT3_06468
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
PCNPT3_06468
yebG
SOS regulon DNA damage-inducible protein
Position: -56
Score: 6.1
Sequence: TACTGTTTAAAAAAACAGTA
Position: -33
Score: 5.6
Sequence: CACTGTTCATACAAACAGTA
Locus tag: PCNPT3_10460
Name: recN
Funciton: DNA repair protein RecN
PCNPT3_10460
recN
DNA repair protein RecN
Position: -37
Score: 5.4
Sequence: TACTGTTTTAATTAACAGTG
Locus tag: PCNPT3_12972
Name: uvrA
Funciton: Excinuclease ABC subunit A
PCNPT3_12972
uvrA
Excinuclease ABC subunit A
Position: -28
Score: 5.2
Sequence: TACTGATTAAATAGACAGGT
Locus tag: PCNPT3_01364
Name: uvrD
Funciton: ATP-dependent DNA helicase II
PCNPT3_01364
uvrD
ATP-dependent DNA helicase II
Position: -43
Score: 5.1
Sequence: TACTGTTAACTTATACAGTG
Position: -28
Score: 4
Sequence: CAGTGGTTTTATTTACAGGG
Locus tag: PCNPT3_06983
Name: SSF52540
Funciton: hypothetical protein, P-loop containing nucleoside triphosphate hydrolase family
PCNPT3_06983
SSF52540
hypothetical protein, P-loop containing nucleoside triphosphate hydrolase family
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