Regulon of AgaR in Photobacterium profundum SS9

Properties
Regulator type:	Transcription factor
TF locus tag:	PBPRB1036, PBPRB0140
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	N-acetylgalactosamine utilization
Effector:	N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Regulog:	AgaR - Vibrionales
Statistics of regulated genes:
- Genes	11
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 11 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - AgaR
By TF family - DeoR
By effector - N-acetylgalactosamine-6-phosphate
By effector - Galactosamine-6-phosphate
By pathway - N-acetylgalactosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -201 Score: 6.6 Sequence: GAAAGG-(14)-AGAAAG Locus tag: PBPRB0157 Name: agaY Funciton: Tagatose-1,6-bisphosphate aldolase AgaY (EC 4.1.2.-)
	PBPRB0157	agaY	Tagatose-1,6-bisphosphate aldolase AgaY (EC 4.1.2.-)
Position: -250 Score: 7.3 Sequence: GAAAGG-(16)-TGAAAG Position: -39 Score: 6.6 Sequence: GAAAGA-(14)-CGTAAG Locus tag: PBPRB0140 Name: agaR2 Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family Locus tag: PBPRB0141 Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144) Locus tag: PBPRB0142 Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) Locus tag: PBPRB0143 Name: agaV-II Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69) Locus tag: PBPRB0144 Name: agaW-II Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69) Locus tag: PBPRB0145 Name: agaE-II Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69) Locus tag: PBPRB0146 Name: agaF-II Funciton: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69) Locus tag: PBPRB0147 Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
	PBPRB0140	agaR2	Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
	PBPRB0141	agaZ	Tagatose-6-phosphate kinase (EC 2.7.1.144)
	PBPRB0142	agaS	Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
	PBPRB0143	agaV-II	PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
	PBPRB0144	agaW-II	PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
	PBPRB0145	agaE-II	PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
	PBPRB0146	agaF-II	PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
	PBPRB0147	agaA	N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
Position: -146 Score: 7.4 Sequence: GAAAGG-(16)-CGAAAG Position: -49 Score: 7.4 Sequence: GAAACA-(14)-CGAAAT Locus tag: PBPRB1036 Name: agaR Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family Locus tag: PBPRB1037 Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
	PBPRB1036	agaR	Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
	PBPRB1037	agaZ	Tagatose-6-phosphate kinase (EC 2.7.1.144)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD