Regulon of AgaR in Vibrio fischeri ES114

Properties
Regulator type:	Transcription factor
TF locus tag:	VF_A1006
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	N-acetylgalactosamine utilization
Effector:	N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Regulog:	AgaR - Vibrionales
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 11 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - AgaR
By TF family - DeoR
By effector - N-acetylgalactosamine-6-phosphate
By effector - Galactosamine-6-phosphate
By pathway - N-acetylgalactosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -180 Score: 6.5 Sequence: AAAACA-(15)-CGAAAG Locus tag: VF_A0989 Name: agaY Funciton: Tagatose-1,6-bisphosphate aldolase AgaY (EC 4.1.2.-)
	VF_A0989	agaY	Tagatose-1,6-bisphosphate aldolase AgaY (EC 4.1.2.-)
Position: -60 Score: 6.4 Sequence: GTAAGG-(16)-CGAAAG Locus tag: VF_A1006 Name: agaR2 Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family Locus tag: VF_A1005 Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144) Locus tag: VF_A1004 Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) Locus tag: VF_A1003 Name: agaV-II Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69) Locus tag: VF_A1002 Name: agaW-II Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69) Locus tag: VF_A1001 Name: agaE-II Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69) Locus tag: VF_A1000 Name: agaF-II Funciton: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69) Locus tag: VF_A0999 Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
	VF_A1006	agaR2	Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
	VF_A1005	agaZ	Tagatose-6-phosphate kinase (EC 2.7.1.144)
	VF_A1004	agaS	Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
	VF_A1003	agaV-II	PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
	VF_A1002	agaW-II	PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
	VF_A1001	agaE-II	PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
	VF_A1000	agaF-II	PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
	VF_A0999	agaA	N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD