Regulon of AgaR in Vibrio vulnificus CMCP6

Properties
Regulator type:	Transcription factor
TF locus tag:	VV21025
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	N-acetylgalactosamine utilization
Effector:	N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Regulog:	AgaR - Vibrionales
Statistics of regulated genes:
- Genes	9
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 11 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - AgaR
By TF family - DeoR
By effector - N-acetylgalactosamine-6-phosphate
By effector - Galactosamine-6-phosphate
By pathway - N-acetylgalactosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -144 Score: 7.4 Sequence: GAAAGG-(16)-CGAAAG Position: -47 Score: 7 Sequence: GAAAGC-(14)-TGAAAG Locus tag: VV21025 Name: agaR Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family Locus tag: VV21024 Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144) Locus tag: VV21023 Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) Locus tag: VV21022 Name: agaV Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69) Locus tag: VV21021 Name: agaW Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69) Locus tag: VV21020 Name: agaE Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69) Locus tag: VV21019 Name: agaF Funciton: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69) Locus tag: VV21018 Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) Locus tag: VV21017 Name: agaY Funciton: Tagatose-1,6-bisphosphate aldolase AgaY (EC 4.1.2.-)
	VV21025	agaR	Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
	VV21024	agaZ	Tagatose-6-phosphate kinase (EC 2.7.1.144)
	VV21023	agaS	Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
	VV21022	agaV	PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
	VV21021	agaW	PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
	VV21020	agaE	PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
	VV21019	agaF	PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
	VV21018	agaA	N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
	VV21017	agaY	Tagatose-1,6-bisphosphate aldolase AgaY (EC 4.1.2.-)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD