Regulon of NanR (SiaQ) in Vibrio shilonii AK1
| Regulator type: | Transcription factor |
| TF locus tag: | VSAK1_18319 |
| Regulator family: | RpiR |
| Regulation mode: | repressor |
| Biological process: | Sialic acid utilization |
| Effector: | N-acetylmannosamine-6-phosphate |
| Regulog: | NanR (SiaQ) - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By TF family - RpiR
- By effector - N-acetylmannosamine-6-phosphate
- By pathway - Sialic acid utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -115
Score: 6 Sequence: TTTGAAAATAATCTTCACG
Locus tag: VSAK1_18299
Name: siaP Funciton: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
Locus tag: VSAK1_18304
Name: siaS Funciton: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
Locus tag: VSAK1_18309
Name: siaT Funciton: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
Locus tag: VSAK1_18314
Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: VSAK1_18319
Name: nanR Funciton: Sialic acid utilization regulator, RpiR family |
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siaP
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TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
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siaS
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TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
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siaT
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TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
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nanA
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N-acetylneuraminate lyase (EC 4.1.3.3)
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nanR
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Sialic acid utilization regulator, RpiR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |