Regulon of HexR in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type:	Transcription factor
TF locus tag:	PSPTO1299
Regulator family:	RpiR
Regulation mode:	repressor (activator)
Biological process:	Central carbohydrate metabolism
Effector:	2-keto-3-deoxy-6-phosphogluconate
Regulog:	HexR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By trascription factor - HexR
By taxonomy - Pseudomonadaceae
By TF family - RpiR
By effector - 2-keto-3-deoxy-6-phosphogluconate
By pathway - Central carbohydrate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -154 Score: 7.8 Sequence: ATGTAGT-(7)-ACAACAT Locus tag: PSPTO1299 Name: hexR Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family
	PSPTO1299	hexR	Central carbohydrate metabolism transcription regulator HexR, RpiR family
Position: -201 Score: 7.5 Sequence: TTGTTGT-(7)-ACAAGAT Position: -140 Score: 6.9 Sequence: ATtTTGT-(7)-ACAACta Locus tag: PSPTO1288 Name: edd Funciton: Phosphogluconate dehydratase (EC 4.2.1.12) Locus tag: PSPTO1289 Name: glk Funciton: Glucokinase (EC 2.7.1.2) Locus tag: PSPTO1290 Name: gltR Funciton: DNA-binding response regulator GltR, controls specific porins for the entry of glucose Locus tag: PSPTO1291 Name: gltS Funciton: Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster
	PSPTO1288	edd	Phosphogluconate dehydratase (EC 4.2.1.12)
	PSPTO1289	glk	Glucokinase (EC 2.7.1.2)
	PSPTO1290	gltR	DNA-binding response regulator GltR, controls specific porins for the entry of glucose
	PSPTO1291	gltS	Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster
Position: -85 Score: 7.8 Sequence: ATGTTGT-(7)-ACTACAT Locus tag: PSPTO1300 Name: zwf Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Locus tag: PSPTO1301 Name: pgl Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Locus tag: PSPTO1302 Name: eda Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
	PSPTO1300	zwf	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
	PSPTO1301	pgl	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
	PSPTO1302	eda	4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -98 Score: 6.3 Sequence: TTGTAGA-(4)-ACAAAAT Position: -39 Score: 7.5 Sequence: ATCTTGT-(7)-ACAACAA Locus tag: PSPTO1287 Name: gapA Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
	PSPTO1287	gapA	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD