Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HexR in Pseudomonas mendocina ymp

Properties
Regulator type: Transcription factor
TF locus tag: Pmen_3144
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Regulog: HexR - Pseudomonadaceae
Statistics of regulated genes:
- Genes 9
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 44 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -138
Score: 8.1
Sequence: ATGTTGT-(7)-ACAACAT
Locus tag: Pmen_3144
Name: hexR
Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family
hexR
Central carbohydrate metabolism transcription regulator HexR, RpiR family

Position: -193
Score: 7.7
Sequence: TTGTTGT-(8)-ACAACAA
Locus tag: Pmen_1147
Name: glk
Funciton: Glucokinase (EC 2.7.1.2)
Locus tag: Pmen_1148
Name: gltR
Funciton: DNA-binding response regulator GltR, controls specific porins for the entry of glucose
Locus tag: Pmen_1149
Name: gltS
Funciton: Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster
glk
Glucokinase (EC 2.7.1.2)
gltR
DNA-binding response regulator GltR, controls specific porins for the entry of glucose
gltS
Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster

Position: -97
Score: 6.3
Sequence: TTGTATT-(4)-ACAAAAT
Position: -38
Score: 7.5
Sequence: ATCTTGT-(7)-ACAACAA
Locus tag: Pmen_1311
Name: gapA
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
gapA
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)

Position: -111
Score: 7.5
Sequence: TTGTTGT-(7)-ACAAGAT
Position: -50
Score: 6.5
Sequence: ATtTTGT-(7)-ACAAaca
Locus tag: Pmen_1312
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
edd
Phosphogluconate dehydratase (EC 4.2.1.12)

Position: -85
Score: 8.1
Sequence: ATGTTGT-(7)-ACAACAT
Locus tag: Pmen_3143
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: Pmen_3142
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: Pmen_3141
Name: eda
Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
eda
4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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Regulatory Sites [ FASTA format ] DOWNLOAD