Regulon of HexR in Pseudomonas mendocina ymp

Properties
Regulator type:	Transcription factor
TF locus tag:	Pmen_3144
Regulator family:	RpiR
Regulation mode:	repressor (activator)
Biological process:	Central carbohydrate metabolism
Effector:	2-keto-3-deoxy-6-phosphogluconate
Regulog:	HexR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	9
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By trascription factor - HexR
By taxonomy - Pseudomonadaceae
By TF family - RpiR
By effector - 2-keto-3-deoxy-6-phosphogluconate
By pathway - Central carbohydrate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -138 Score: 8.1 Sequence: ATGTTGT-(7)-ACAACAT Locus tag: Pmen_3144 Name: hexR Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family
	Pmen_3144	hexR	Central carbohydrate metabolism transcription regulator HexR, RpiR family
Position: -193 Score: 7.7 Sequence: TTGTTGT-(8)-ACAACAA Locus tag: Pmen_1147 Name: glk Funciton: Glucokinase (EC 2.7.1.2) Locus tag: Pmen_1148 Name: gltR Funciton: DNA-binding response regulator GltR, controls specific porins for the entry of glucose Locus tag: Pmen_1149 Name: gltS Funciton: Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster
	Pmen_1147	glk	Glucokinase (EC 2.7.1.2)
	Pmen_1148	gltR	DNA-binding response regulator GltR, controls specific porins for the entry of glucose
	Pmen_1149	gltS	Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster
Position: -97 Score: 6.3 Sequence: TTGTATT-(4)-ACAAAAT Position: -38 Score: 7.5 Sequence: ATCTTGT-(7)-ACAACAA Locus tag: Pmen_1311 Name: gapA Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
	Pmen_1311	gapA	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Position: -111 Score: 7.5 Sequence: TTGTTGT-(7)-ACAAGAT Position: -50 Score: 6.5 Sequence: ATtTTGT-(7)-ACAAaca Locus tag: Pmen_1312 Name: edd Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
	Pmen_1312	edd	Phosphogluconate dehydratase (EC 4.2.1.12)
Position: -85 Score: 8.1 Sequence: ATGTTGT-(7)-ACAACAT Locus tag: Pmen_3143 Name: zwf Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Locus tag: Pmen_3142 Name: pgl Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Locus tag: Pmen_3141 Name: eda Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
	Pmen_3143	zwf	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
	Pmen_3142	pgl	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
	Pmen_3141	eda	4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD