Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HexR2 in Marinobacter sp. ELB17

Properties
Regulator type: Transcription factor
TF locus tag: MELB17_08903
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Regulog: HexR2 - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes 7
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -125
Score: -0.8
Sequence: GTAGTAAATGTA
Locus tag: MELB17_08933
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
edd
Phosphogluconate dehydratase (EC 4.2.1.12)

Position: -149
Score: -0.8
Sequence: GTAGTAATTTTA
Locus tag: MELB17_08903
Name: hexR
Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family
hexR
Central carbohydrate metabolism transcription regulator HexR, RpiR family

Position: -58
Score: 5.2
Sequence: TACATTTACTAC
Locus tag: MELB17_08928
Name: gapA
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: MELB17_08923
Name: pykA
Funciton: Pyruvate kinase (EC 2.7.1.40)
gapA
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
pykA
Pyruvate kinase (EC 2.7.1.40)

Position: -13
Score: 5.5
Sequence: TAAAATTACTAC
Locus tag: MELB17_08908
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: MELB17_08913
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: MELB17_08918
Name: eda
Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
eda
4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD