Regulon of TyrR1 in Pseudoalteromonas atlantica T6c

Properties
Regulator type:	Transcription factor
TF locus tag:	Patl_2998
Regulator family:	TyrR
Regulation mode:	activator (repressor)
Biological process:	Aromatic amino acid metabolism
Effector:	Tyrosine; Phenylalanine
Regulog:	TyrR1 - Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 32 sites [see more]

Member of regulog collections

By trascription factor - TyrR
By taxonomy - Alteromonadales
By TF family - TyrR
By effector - Tyrosine
By effector - Phenylalanine
By pathway - Aromatic amino acid metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -195 Score: 4.6 Sequence: CTGTAGCGTTAAGTTGACAA Position: -123 Score: 4.7 Sequence: ATGTAAAGTTTATGTTACTT Locus tag: Patl_2997 Name: hpd Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
	Patl_2997	hpd	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
Position: -41 Score: 5.6 Sequence: GTGTAATATTATCTTTACAT Locus tag: Patl_2998 Name: tyrR1 Funciton: Transcriptional regulator of aromatic amino acid biosynthesis and degradation, TyrR family
	Patl_2998	tyrR1	Transcriptional regulator of aromatic amino acid biosynthesis and degradation, TyrR family
Position: -117 Score: 5 Sequence: TTGTAGCTTAATGTTTACAT Position: -96 Score: 4.5 Sequence: TTGTAATTTTATTGTTGCTA Locus tag: Patl_2999 Name: phhA Funciton: Phenylalanine-4-hydroxylase (EC 1.14.16.1)
	Patl_2999	phhA	Phenylalanine-4-hydroxylase (EC 1.14.16.1)
Position: -108 Score: 5.2 Sequence: TTGTAGTTATATGTTTACAT Locus tag: Patl_1587 Name: aroF Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) Locus tag: Patl_1588 Name: tyrA Funciton: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)
	Patl_1587	aroF	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
	Patl_1588	tyrA	Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD