Regulon of GlcC in Pseudomonas mendocina ymp

Properties
Regulator type:	Transcription factor
TF locus tag:	Pmen_0204
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Glycolate utilization
Effector:	Glycolate
Regulog:	GlcC - Pseudomonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 24 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - GlcC
By TF family - GntR/Others
By effector - Glycolate
By pathway - Glycolate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -224 Score: 6.1 Sequence: AACTGGTCGTACCAGTT Position: -115 Score: 6 Sequence: AACTGGTCATACCAGCA Locus tag: Pmen_0203 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: Pmen_0202 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: Pmen_0201 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Locus tag: Pmen_0200 Name: glcG Funciton: Hypothetical protein GlcG in glycolate utilization operon Locus tag: Pmen_0199 Name: glcB Funciton: Malate synthase G (EC 2.3.3.9)
	Pmen_0203	glcD	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
	Pmen_0202	glcE	Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
	Pmen_0201	glcF	Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
	Pmen_0200	glcG	Hypothetical protein GlcG in glycolate utilization operon
	Pmen_0199	glcB	Malate synthase G (EC 2.3.3.9)
Position: -141 Score: 4.7 Sequence: TGCTGGTATGACCAGTT Position: -32 Score: 5.8 Sequence: AACTGGTACGACCAGTT Locus tag: Pmen_0204 Name: glcC Funciton: Glycolate utilization operon transcriptional activator GlcC
	Pmen_0204	glcC	Glycolate utilization operon transcriptional activator GlcC

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD