Regulon of SiaR in Psychromonas sp. CNPT3

Properties
Regulator type:	Transcription factor
TF locus tag:	PCNPT3_00805
Regulator family:	RpiR
Regulation mode:	repressor
Biological process:	Sialic acid utilization
Effector:	Glucosamine-6-phosphate
Regulog:	SiaR - Psychromonadaceae/Aeromonadales
Statistics of regulated genes:
- Genes	10
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Psychromonadaceae/Aeromonadales
By trascription factor - SiaR
By TF family - RpiR
By effector - Glucosamine-6-phosphate
By pathway - Sialic acid utilization

Regulated operons
	Locus Tag	Name	Function
Position: -188 Score: 4.4 Sequence: AATGGAGCTCAACTCCAAG Position: -93 Score: 4.7 Sequence: GTTGAAGTAAAGCTCCGTT Locus tag: PCNPT3_02946 Name: siaP Funciton: Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP) Locus tag: PCNPT3_02951 Name: siaS Funciton: TRAP-type transport system, small permease component, N-acetylneuraminate transporter Locus tag: PCNPT3_02956 Name: siaT Funciton: TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter
	PCNPT3_02946	siaP	Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP)
	PCNPT3_02951	siaS	TRAP-type transport system, small permease component, N-acetylneuraminate transporter
	PCNPT3_02956	siaT	TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter
Position: -76 Score: 5.5 Sequence: ATTGAAGTTTTACTCCAAA Position: -18 Score: 5.3 Sequence: TTTGGAGTTTAACTACATA Locus tag: PCNPT3_00800 Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Locus tag: PCNPT3_00795 Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60) Locus tag: PCNPT3_00790 Name: yhcH Funciton: Uncharacterized protein yhcH
	PCNPT3_00800	nanE	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
	PCNPT3_00795	nanK	N-acetylmannosamine kinase (EC 2.7.1.60)
	PCNPT3_00790	yhcH	Uncharacterized protein yhcH
Position: -215 Score: 5.2 Sequence: ATTGAAGTTTCACTCCAAA Position: -157 Score: 5 Sequence: TTTGGAGTTTAGCTACATA Locus tag: PCNPT3_02205 Name: nanP Funciton: Sialic acid transporter
	PCNPT3_02205	nanP	Sialic acid transporter
Position: -90 Score: 4.2 Sequence: AAAGAAATATTTTTTCATT Locus tag: PCNPT3_09404 Name: nanM Funciton: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
	PCNPT3_09404	nanM	Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
Position: -39 Score: 4.7 Sequence: AACGGAGTTTAATTTCTCT Locus tag: PCNPT3_00810 Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
	PCNPT3_00810	nanA	N-acetylneuraminate lyase (EC 4.1.3.3)
Position: -89 Score: 4.3 Sequence: AGTAAAATTAAACTTTATT Locus tag: PCNPT3_13193 Name: glmU Funciton: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
	PCNPT3_13193	glmU	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD