Regulon of SiaR in Photobacterium profundum SS9

Properties
Regulator type:	Transcription factor
TF locus tag:	PBPRA2286
Regulator family:	RpiR
Regulation mode:	repressor
Biological process:	Sialic acid utilization
Effector:	Glucosamine-6-phosphate
Regulog:	SiaR - Vibrionales
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - SiaR
By TF family - RpiR
By effector - Glucosamine-6-phosphate
By pathway - Sialic acid utilization

Regulated operons
	Locus Tag	Name	Function
Position: -118 Score: 4.8 Sequence: TTTGAAGAAAACCTTCATA Locus tag: PBPRA2281 Name: siaP Funciton: Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP) Locus tag: PBPRA2280 Name: siaS Funciton: TRAP-type transport system, small permease component, N-acetylneuraminate transporter Locus tag: PBPRA2279 Name: siaT Funciton: TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter
	PBPRA2281	siaP	Sialic acid-binding periplasmic protein SiaP (N-acetylneuraminic-binding protein) (Neu5Ac-binding protein)(Extracytoplasmic solute receptor protein siaP)
	PBPRA2280	siaS	TRAP-type transport system, small permease component, N-acetylneuraminate transporter
	PBPRA2279	siaT	TRAP-type transport system, large permease component, N-acetylneuraminate transporter / TRAP-type transport system, small permease component, N-acetylneuraminate transporter
Position: -226 Score: 5 Sequence: TATGGAGTTAGGCTCCATT Position: -105 Score: 5.2 Sequence: GTTGAAGTAAAACTTCATC Position: -78 Score: 5.5 Sequence: GGTGGAGTTAAACTTCATT Locus tag: PBPRA2285 Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Locus tag: PBPRA2284 Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60) Locus tag: PBPRA2283 Name: nanT Funciton: Sialic acid transporter (permease) NanT Locus tag: PBPRA2282 Name: yhcH Funciton: Uncharacterized protein yhcH
	PBPRA2285	nanE	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
	PBPRA2284	nanK	N-acetylmannosamine kinase (EC 2.7.1.60)
	PBPRA2283	nanT	Sialic acid transporter (permease) NanT
	PBPRA2282	yhcH	Uncharacterized protein yhcH
Position: -83 Score: 5.3 Sequence: TATGGAGTTTAGCTTCACA Locus tag: PBPRA2286 Name: siaR Funciton: Sialic acid utilization regulator, RpiR family
	PBPRA2286	siaR	Sialic acid utilization regulator, RpiR family
Position: -38 Score: 5.1 Sequence: TGTGAAGTTTAACTTCGCT Locus tag: PBPRA2287 Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
	PBPRA2287	nanA	N-acetylneuraminate lyase (EC 4.1.3.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD