Regulon of SiaR in Vibrio fischeri ES114

Properties
Regulator type:	Transcription factor
TF locus tag:	VF_0664
Regulator family:	RpiR
Regulation mode:	repressor
Biological process:	Sialic acid utilization
Effector:	Glucosamine-6-phosphate
Regulog:	SiaR - Vibrionales
Statistics of regulated genes:
- Genes	8
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - SiaR
By TF family - RpiR
By effector - Glucosamine-6-phosphate
By pathway - Sialic acid utilization

Regulated operons
	Locus Tag	Name	Function
Position: -51 Score: 4.9 Sequence: TTCGGAGTGTAACTCCAAT Locus tag: VF_0665 Name: nagA2 Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	VF_0665	nagA2	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Position: -195 Score: 4.9 Sequence: ATTGGAGTTACACTCCGAA Position: -43 Score: 5.1 Sequence: ATTGAAGTATTACTCCGTT Locus tag: VF_0666 Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Locus tag: VF_0667 Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60) Locus tag: VF_0668 Name: nanT Funciton: Sialic acid transporter (permease) NanT Locus tag: VF_0669 Name: yhcH Funciton: Uncharacterized protein yhcH
	VF_0666	nanE	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
	VF_0667	nanK	N-acetylmannosamine kinase (EC 2.7.1.60)
	VF_0668	nanT	Sialic acid transporter (permease) NanT
	VF_0669	yhcH	Uncharacterized protein yhcH
Position: -80 Score: 5.3 Sequence: TATGGAGTTACACTTCACA Locus tag: VF_0664 Name: siaR Funciton: Sialic acid utilization regulator, RpiR family
	VF_0664	siaR	Sialic acid utilization regulator, RpiR family
Position: -91 Score: 5 Sequence: AATGAAACTTTACTCCATA Position: -42 Score: 5.4 Sequence: AATGAAGAATAACTTCATT Locus tag: VF_0663 Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
	VF_0663	nanA	N-acetylneuraminate lyase (EC 4.1.3.3)
Position: -116 Score: 4.9 Sequence: CTTGAAGTTAAACTCCGTA Position: -88 Score: 5.6 Sequence: TTTGGAGTATAACTTCATA Locus tag: VF_A0786 Name: ptsG2 Funciton: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
	VF_A0786	ptsG2	PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD