Regulon of SiaR in Yersinia pestis KIM
| Regulator type: | Transcription factor |
| TF locus tag: | y1464 |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Sialic acid utilization |
| Effector: | Glucosamine-6-phosphate |
| Regulog: | SiaR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - SiaR
- By TF family - RpiR
- By effector - Glucosamine-6-phosphate
- By pathway - Sialic acid utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -46
Score: 5.9 Sequence: AATGGAGTTAAACTTCATT
Locus tag: y1459
Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: y1458
Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3) |
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nanE
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N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
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nanA
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N-acetylneuraminate lyase (EC 4.1.3.3)
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Position: -111
Score: 5.4 Sequence: AAAGGAGTTTAACTCCAAA
Locus tag: y1461
Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
Locus tag: y1462
Name: yhcH Funciton: Uncharacterized protein yhcH
Locus tag: y1463
Name: null Funciton: hypothetical protein
Locus tag: y1464
Name: siaR Funciton: Sialic acid utilization regulator, RpiR family |
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nanK
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N-acetylmannosamine kinase (EC 2.7.1.60)
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yhcH
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Uncharacterized protein yhcH
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hypothetical protein
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siaR
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Sialic acid utilization regulator, RpiR family
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Position: -188
Score: 5.5 Sequence: AATGGAGTTTTACTCCTTT
Locus tag: y1465
Name: nanT Funciton: Sialic acid transporter (permease) NanT |
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nanT
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Sialic acid transporter (permease) NanT
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |