Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Irr in Xanthobacter autotrophicus Py2

Properties
Regulator type: Transcription factor
TF locus tag: Xaut_3845
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Heme
Regulog: Irr - Rhizobiales
Statistics of regulated genes:
- Genes 19
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 122 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -158
Score: 6
Sequence: GATTTAGAATAATTCTAATCT
Locus tag: Xaut_4470
Name: sufS2
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: Xaut_4469
Name: sufB
Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: Xaut_4468
Name: sufC
Funciton: ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
Locus tag: Xaut_4467
Name: sufD
Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: Xaut_4466
Name: sufS1
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: Xaut_4465
Name: PF01883
Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Locus tag: Xaut_4464
Name: PF00903
Funciton: putative lactoylglutathione lyase
Xaut_4470
sufS2
Cysteine desulfurase (EC 2.8.1.7)
Xaut_4469
sufB
ABC transporter involved in Fe-S cluster assembly, permease protein
Xaut_4468
sufC
ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
Xaut_4467
sufD
ABC transporter involved in Fe-S cluster assembly, permease protein
Xaut_4466
sufS1
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Xaut_4465
PF01883
PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Xaut_4464
PF00903
putative lactoylglutathione lyase
Position: -34
Score: 4.7
Sequence: TTTTTAGAAGCTTTCCAATTT
Locus tag: Xaut_3766
Name: bfd
Funciton: [2Fe-2S]-binding protein, bacterioferritin
Locus tag: Xaut_3765
Name: bfr
Funciton: Bacterioferritin
Xaut_3766
bfd
[2Fe-2S]-binding protein, bacterioferritin
Xaut_3765
bfr
Bacterioferritin
Position: -34
Score: 5.3
Sequence: ATATTAGAAATATTCTAATTT
Locus tag: Xaut_2011
Name: mbfA
Funciton: membrane-bound ferritin
Xaut_2011
mbfA
membrane-bound ferritin
Position: -56
Score: 4.6
Sequence: AACTTTGAAAAAATCAAAACT
Locus tag: Xaut_4192
Name: hmuT
Funciton: Hemin ABC transporter, hemin-binding protein
Locus tag: Xaut_4193
Name: hmuU
Funciton: Hemin ABC transporter, permease protein
Locus tag: Xaut_4194
Name: hmuV
Funciton: Hemin ABC transporter, ATPase component
Xaut_4192
hmuT
Hemin ABC transporter, hemin-binding protein
Xaut_4193
hmuU
Hemin ABC transporter, permease protein
Xaut_4194
hmuV
Hemin ABC transporter, ATPase component
Position: -149
Score: 4.5
Sequence: TAATTGGAACGATTTCAAAGA
Locus tag: Xaut_3764
Name: fbpA
Funciton: Ferric iron ABC transporter, periplasmic protein
Locus tag: Xaut_3763
Name: fbpB
Funciton: Ferric iron ABC transporter, permease protein
Xaut_3764
fbpA
Ferric iron ABC transporter, periplasmic protein
Xaut_3763
fbpB
Ferric iron ABC transporter, permease protein
Position: -8
Score: 5.2
Sequence: TTTTTAGAATGAATCAAAATA
Locus tag: Xaut_1186
Name: PF00033
Funciton: cytochrome b561
Xaut_1186
PF00033
cytochrome b561
Position: -221
Score: 4.6
Sequence: AGTTTTGATTTTTTCAAAGTT
Locus tag: Xaut_4191
Name: hmuR
Funciton: TonB-dependent haem/haemoglobin receptor
Xaut_4191
hmuR
TonB-dependent haem/haemoglobin receptor
Position: -78
Score: 5.7
Sequence: AGTATTGAATACTTCTAAACT
Position: -19
Score: 4.5
Sequence: GATCTGGAGCGATTCAAAAAT
Locus tag: Xaut_4550
Name: hmuP
Funciton: Hemin ABC transporter, hemin uptake protein
Xaut_4550
hmuP
Hemin ABC transporter, hemin uptake protein
Position: -238
Score: 5.5
Sequence: TGATTTGAACAATTCAAAACA
Position: -125
Score: 4.8
Sequence: GTTTTGGAAATGTTCAAATCT
Locus tag: Xaut_3198
Name: ftr1
Funciton: High-affinity Fe2+/Pb2+ permease
Xaut_3198
ftr1
High-affinity Fe2+/Pb2+ permease
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise