Regulon of Irr in Bradyrhizobium japonicum USDA 110
| Regulator type: | Transcription factor |
| TF locus tag: | blr1216, bll0768 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Heme |
| Regulog: | Irr - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 20 |
| - Operons | 11 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - Irr
- By taxonomy - Rhizobiales
- By TF family - FUR
- By effector - Heme
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -62
Score: 5.7 Sequence: CATTTAGAAGCGTTCTAAATT
Locus tag: bll6680
Name: bfr Funciton: Bacterioferritin |
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bfr
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Bacterioferritin
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Position: -38
Score: 6.7 Sequence: AATTTAGAATCATTCTAAACT
Locus tag: blr7895
Name: mbfA Funciton: membrane-bound ferritin |
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mbfA
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membrane-bound ferritin
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Position: -52
Score: 5.1 Sequence: TGATTTGAACAGTTCCAATTT
Locus tag: bll2737
Name: coxS Funciton: Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)
Locus tag: bll2736
Name: coxL Funciton: Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16) |
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coxS
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Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)
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coxL
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Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)
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Position: -116
Score: 5.1 Sequence: CGCTTAGAACCATTCAACACT
Locus tag: bll7968
Name: fhuA3 Funciton: Ferrichrome-iron outer membrane receptor
Locus tag: bll7967
Name: piuB Funciton: Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB |
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fhuA3
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Ferrichrome-iron outer membrane receptor
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piuB
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Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB
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Position: -79
Score: 5 Sequence: ACTTTAAAATCACTCTAAGGT
Locus tag: bsr6522
Name: null Funciton: Ferrous iron transport protein A
Locus tag: blr6523
Name: null Funciton: Ferrous iron transport protein B |
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Ferrous iron transport protein A
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Ferrous iron transport protein B
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Position: -302
Score: 4.7 Sequence: AGTTTATATCGATTGTAAATT
Locus tag: blr7077
Name: hmuT Funciton: Hemin ABC transporter, hemin-binding protein
Locus tag: blr7078
Name: hmuU Funciton: Hemin ABC transporter, permease protein
Locus tag: blr7079
Name: hmuV Funciton: Hemin ABC transporter, ATPase component |
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hmuT
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Hemin ABC transporter, hemin-binding protein
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hmuU
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Hemin ABC transporter, permease protein
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hmuV
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Hemin ABC transporter, ATPase component
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Position: -167
Score: 4.7 Sequence: AATTTACAATCGATATAAACT
Locus tag: bll7076
Name: hmuR Funciton: TonB-dependent haem/haemoglobin receptor |
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hmuR
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TonB-dependent haem/haemoglobin receptor
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Position: -128
Score: 5.2 Sequence: ATTTTAGAGCCGTTCTAGGCT
Position: -96
Score: 4.9 Sequence: AGTTTGGAATAGCTTCAAATA
Locus tag: bsl6681
Name: bfd Funciton: [2Fe-2S]-binding protein, bacterioferritin |
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bfd
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[2Fe-2S]-binding protein, bacterioferritin
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Position: -169
Score: 4.8 Sequence: CGTCTAGAAGGATTCCAAATC
Locus tag: blr4504
Name: fhuA1 Funciton: Outer membrane receptor for ferrienterochelin and colicins |
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fhuA1
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Outer membrane receptor for ferrienterochelin and colicins
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Position: -62
Score: 4.6 Sequence: AGCTTAGAACGCTTCTATGCC
Locus tag: bll5796
Name: fumA Funciton: Fumarate hydratase class I, aerobic (EC 4.2.1.2) |
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fumA
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Fumarate hydratase class I, aerobic (EC 4.2.1.2)
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Position: -184
Score: 4.9 Sequence: GTTTTAGAACGACTCCAATTT
Position: -162
Score: 5.7 Sequence: ACTTTAGAACCGTTTGAAACT
Position: -139
Score: 4.9 Sequence: AGATTAGAATCGTTTTGATCT
Locus tag: blr3904
Name: fiu Funciton: TonB-dependent siderophore recepror
Locus tag: blr3905
Name: piuC Funciton: Hydrolase, involved in iron uptake
Locus tag: blr3906
Name: exbB2 Funciton: Ferric siderophore transport system, proton channel
Locus tag: blr3907
Name: exbD2 Funciton: biopolymer transport protein ExbD
Locus tag: blr3908
Name: tonB2 Funciton: Ferric siderophore transport system energy transducer |
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fiu
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TonB-dependent siderophore recepror
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piuC
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Hydrolase, involved in iron uptake
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exbB2
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Ferric siderophore transport system, proton channel
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exbD2
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biopolymer transport protein ExbD
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tonB2
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Ferric siderophore transport system energy transducer
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |