Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Irr in Rhizobium leguminosarum bv. viciae 3841

Properties
Regulator type: Transcription factor
TF locus tag: RL0115, pRL110146
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Heme
Regulog: Irr - Rhizobiales
Statistics of regulated genes:
- Genes 25
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 122 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -134
Score: 6.6
Sequence: AGTTTAGAACAATTCGAAACT
Locus tag: RL2583
Name: sufS2
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: RL2582
Name: sufB
Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: RL2581
Name: null
Funciton: hypothetical protein
Locus tag: RL2580
Name: sufC
Funciton: ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
Locus tag: RL2579
Name: sufD
Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: RL2578
Name: sufS1
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: RL2577
Name: PF01883
Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Locus tag: RL2576
Name: sufA
Funciton: Iron binding protein SufA for iron-sulfur cluster assembly
RL2583
sufS2
Cysteine desulfurase (EC 2.8.1.7)
RL2582
sufB
ABC transporter involved in Fe-S cluster assembly, permease protein
RL2581
hypothetical protein
RL2580
sufC
ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
RL2579
sufD
ABC transporter involved in Fe-S cluster assembly, permease protein
RL2578
sufS1
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
RL2577
PF01883
PaaD-like protein (DUF59) involved in Fe-S cluster assembly
RL2576
sufA
Iron binding protein SufA for iron-sulfur cluster assembly
Position: -57
Score: 5.4
Sequence: TCTTTTGAAGCATTCTAAAGA
Locus tag: RL0400
Name: fssA
Funciton: putative nifU-like iron-sulphur cluster scaffold protein
RL0400
fssA
putative nifU-like iron-sulphur cluster scaffold protein
Position: -34
Score: 6.2
Sequence: GATTTAGAATTATTCTAAAAT
Locus tag: RL0263
Name: mbfA
Funciton: membrane-bound ferritin
RL0263
mbfA
membrane-bound ferritin
Position: -207
Score: 5.3
Sequence: TTCTTAAAATCATTCCAAACT
Locus tag: RL0322
Name: iprA
Funciton: Iron-regulated protein A precursor
RL0322
iprA
Iron-regulated protein A precursor
Position: -67
Score: 6.1
Sequence: ATTTTGGAATTGTTCAAAACT
Locus tag: RL0777
Name: rirA
Funciton: Iron-responsive transcriptional regulator RirA, Rrf2 family
RL0777
rirA
Iron-responsive transcriptional regulator RirA, Rrf2 family
Position: -118
Score: 5.4
Sequence: TATCTGGAATCATTCAAAACT
Locus tag: RL4379
Name: hemA
Funciton: 5-aminolevulinate synthase (EC 2.3.1.37)
RL4379
hemA
5-aminolevulinate synthase (EC 2.3.1.37)
Position: -92
Score: 4.9
Sequence: AGTTTGGAAACGCTCTAAAAC
Locus tag: RL2713
Name: irp6A
Funciton: Iron ABC transporter periplasmic protein
Locus tag: RL2714
Name: irp6B
Funciton: Iron ABC transporter permease component
Locus tag: RL2715
Name: irp6C
Funciton: Iron ABC transporter, ATP-binding protein
RL2713
irp6A
Iron ABC transporter periplasmic protein
RL2714
irp6B
Iron ABC transporter permease component
RL2715
irp6C
Iron ABC transporter, ATP-binding protein
Position: -54
Score: 4.9
Sequence: GATTTAGACCGGTTCCAATCT
Locus tag: RL2703
Name: fumA
Funciton: Fumarate hydratase class I, aerobic (EC 4.2.1.2)
RL2703
fumA
Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Position: -107
Score: 5.5
Sequence: AGTCGAGAACAGTTCTAAACA
Locus tag: RL1432
Name: null
Funciton: Hypothetical signal peptide protein
Locus tag: RL1433
Name: feuP
Funciton: two component transcriptional regulator
Locus tag: RL1434
Name: feuQ
Funciton: two-component sensor histidine kinase
Locus tag: RL1435
Name: lipA
Funciton: outer membrane lipoprotein
Locus tag: RL1436
Name: cycH
Funciton: Cytochrome c heme lyase subunit CcmH
Locus tag: RL1437
Name: cycJ
Funciton: Cytochrome c-type biogenesis protein, heme chaperone
Locus tag: RL1438
Name: cycK
Funciton: Cytochrome c heme lyase subunit cycK
Locus tag: RL1439
Name: cycL
Funciton: Cytochrome c heme lyase subunit CcmL
RL1432
Hypothetical signal peptide protein
RL1433
feuP
two component transcriptional regulator
RL1434
feuQ
two-component sensor histidine kinase
RL1435
lipA
outer membrane lipoprotein
RL1436
cycH
Cytochrome c heme lyase subunit CcmH
RL1437
cycJ
Cytochrome c-type biogenesis protein, heme chaperone
RL1438
cycK
Cytochrome c heme lyase subunit cycK
RL1439
cycL
Cytochrome c heme lyase subunit CcmL
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