Regulon of Irr in Rhizobium sp. NGR234
| Regulator type: | Transcription factor |
| TF locus tag: | NGR_c35780 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Heme |
| Regulog: | Irr - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 21 |
| - Operons | 11 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - Irr
- By taxonomy - Rhizobiales
- By TF family - FUR
- By effector - Heme
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -140
Score: 6.2 Sequence: ACTTTAGAACCGTTCAAAACT
Locus tag: NGR_c15400
Name: sufS2 Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: NGR_c15410
Name: sufB Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: NGR_c15420
Name: sufC Funciton: ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
Locus tag: NGR_c15430
Name: sufD Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: NGR_c15440
Name: sufS1 Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: NGR_c15450
Name: PF01883 Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Locus tag: NGR_c15460
Name: sufA Funciton: Iron binding protein SufA for iron-sulfur cluster assembly |
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sufS2
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Cysteine desulfurase (EC 2.8.1.7)
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sufB
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ABC transporter involved in Fe-S cluster assembly, permease protein
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sufC
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ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
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sufD
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ABC transporter involved in Fe-S cluster assembly, permease protein
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sufS1
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Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
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PF01883
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PaaD-like protein (DUF59) involved in Fe-S cluster assembly
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sufA
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Iron binding protein SufA for iron-sulfur cluster assembly
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Position: -59
Score: 6 Sequence: ATTTTTGAATTATTCTAAAGA
Locus tag: NGR_c00370
Name: fssA Funciton: putative nifU-like iron-sulphur cluster scaffold protein |
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fssA
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putative nifU-like iron-sulphur cluster scaffold protein
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Position: -32
Score: 6.1 Sequence: TCTTTAGAATTATTCTAAAGA
Locus tag: NGR_c36170
Name: mbfA Funciton: membrane-bound ferritin |
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mbfA
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membrane-bound ferritin
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Position: -114
Score: 5.4 Sequence: AATTTGAAAATGTTCTAAACT
Locus tag: NGR_c36600
Name: iprA Funciton: Iron-regulated protein A precursor |
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iprA
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Iron-regulated protein A precursor
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Position: -62
Score: 5.4 Sequence: AGATTAGAACGACTCTAATAT
Locus tag: NGR_c31850
Name: bfd Funciton: [2Fe-2S]-binding protein, bacterioferritin
Locus tag: NGR_c31840
Name: bfr Funciton: Bacterioferritin |
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bfd
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[2Fe-2S]-binding protein, bacterioferritin
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bfr
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Bacterioferritin
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Position: -72
Score: 5.6 Sequence: CTTTTGGAATTGTTCCAAACT
Locus tag: NGR_c03450
Name: rirA Funciton: Iron-responsive transcriptional regulator RirA, Rrf2 family |
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rirA
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Iron-responsive transcriptional regulator RirA, Rrf2 family
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Position: -112
Score: 5.7 Sequence: GTTTTGGAATAGTTCAAAACT
Locus tag: NGR_c30700
Name: hemA Funciton: 5-aminolevulinate synthase (EC 2.3.1.37) |
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hemA
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5-aminolevulinate synthase (EC 2.3.1.37)
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Position: -135
Score: 5.6 Sequence: AGTTTGGAACAATTCCAAAAG
Locus tag: NGR_c03440
Name: fbpA Funciton: Ferric iron ABC transporter, periplasmic protein |
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fbpA
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Ferric iron ABC transporter, periplasmic protein
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Position: -73
Score: 4 Sequence: TGTTTCAAATTGTGCTGAAAC
Locus tag: NGR_c23520
Name: hmuR Funciton: TonB-dependent haem/haemoglobin receptor |
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hmuR
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TonB-dependent haem/haemoglobin receptor
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Position: -61
Score: 5.4 Sequence: TTTTTAGAAGGATTTGAAACT
Locus tag: NGR_c28500
Name: hemH Funciton: Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) |
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hemH
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Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)
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Position: -86
Score: 5.3 Sequence: TGTTTGGAAGGGTTCTAAAAG
Locus tag: NGR_b11200
Name: irp6A Funciton: Iron ABC transporter periplasmic protein
Locus tag: NGR_b11210
Name: irp6A Funciton: Iron ABC transporter periplasmic protein
Locus tag: NGR_b11220
Name: irp6B Funciton: Iron ABC transporter permease component
Locus tag: NGR_b11230
Name: irp6C Funciton: Iron ABC transporter, ATP-binding protein |
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irp6A
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Iron ABC transporter periplasmic protein
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irp6A
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Iron ABC transporter periplasmic protein
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irp6B
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Iron ABC transporter permease component
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irp6C
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Iron ABC transporter, ATP-binding protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |