Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Irr in Rhizobium sp. NGR234

Properties
Regulator type: Transcription factor
TF locus tag: NGR_c35780
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Heme
Regulog: Irr - Rhizobiales
Statistics of regulated genes:
- Genes 21
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 122 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -140
Score: 6.2
Sequence: ACTTTAGAACCGTTCAAAACT
Locus tag: NGR_c15400
Name: sufS2
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: NGR_c15410
Name: sufB
Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: NGR_c15420
Name: sufC
Funciton: ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
Locus tag: NGR_c15430
Name: sufD
Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: NGR_c15440
Name: sufS1
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: NGR_c15450
Name: PF01883
Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Locus tag: NGR_c15460
Name: sufA
Funciton: Iron binding protein SufA for iron-sulfur cluster assembly
NGR_c15400
sufS2
Cysteine desulfurase (EC 2.8.1.7)
NGR_c15410
sufB
ABC transporter involved in Fe-S cluster assembly, permease protein
NGR_c15420
sufC
ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
NGR_c15430
sufD
ABC transporter involved in Fe-S cluster assembly, permease protein
NGR_c15440
sufS1
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
NGR_c15450
PF01883
PaaD-like protein (DUF59) involved in Fe-S cluster assembly
NGR_c15460
sufA
Iron binding protein SufA for iron-sulfur cluster assembly
Position: -59
Score: 6
Sequence: ATTTTTGAATTATTCTAAAGA
Locus tag: NGR_c00370
Name: fssA
Funciton: putative nifU-like iron-sulphur cluster scaffold protein
NGR_c00370
fssA
putative nifU-like iron-sulphur cluster scaffold protein
Position: -32
Score: 6.1
Sequence: TCTTTAGAATTATTCTAAAGA
Locus tag: NGR_c36170
Name: mbfA
Funciton: membrane-bound ferritin
NGR_c36170
mbfA
membrane-bound ferritin
Position: -114
Score: 5.4
Sequence: AATTTGAAAATGTTCTAAACT
Locus tag: NGR_c36600
Name: iprA
Funciton: Iron-regulated protein A precursor
NGR_c36600
iprA
Iron-regulated protein A precursor
Position: -62
Score: 5.4
Sequence: AGATTAGAACGACTCTAATAT
Locus tag: NGR_c31850
Name: bfd
Funciton: [2Fe-2S]-binding protein, bacterioferritin
Locus tag: NGR_c31840
Name: bfr
Funciton: Bacterioferritin
NGR_c31850
bfd
[2Fe-2S]-binding protein, bacterioferritin
NGR_c31840
bfr
Bacterioferritin
Position: -72
Score: 5.6
Sequence: CTTTTGGAATTGTTCCAAACT
Locus tag: NGR_c03450
Name: rirA
Funciton: Iron-responsive transcriptional regulator RirA, Rrf2 family
NGR_c03450
rirA
Iron-responsive transcriptional regulator RirA, Rrf2 family
Position: -112
Score: 5.7
Sequence: GTTTTGGAATAGTTCAAAACT
Locus tag: NGR_c30700
Name: hemA
Funciton: 5-aminolevulinate synthase (EC 2.3.1.37)
NGR_c30700
hemA
5-aminolevulinate synthase (EC 2.3.1.37)
Position: -135
Score: 5.6
Sequence: AGTTTGGAACAATTCCAAAAG
Locus tag: NGR_c03440
Name: fbpA
Funciton: Ferric iron ABC transporter, periplasmic protein
NGR_c03440
fbpA
Ferric iron ABC transporter, periplasmic protein
Position: -73
Score: 4
Sequence: TGTTTCAAATTGTGCTGAAAC
Locus tag: NGR_c23520
Name: hmuR
Funciton: TonB-dependent haem/haemoglobin receptor
NGR_c23520
hmuR
TonB-dependent haem/haemoglobin receptor
Position: -61
Score: 5.4
Sequence: TTTTTAGAAGGATTTGAAACT
Locus tag: NGR_c28500
Name: hemH
Funciton: Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)
NGR_c28500
hemH
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)
Position: -86
Score: 5.3
Sequence: TGTTTGGAAGGGTTCTAAAAG
Locus tag: NGR_b11200
Name: irp6A
Funciton: Iron ABC transporter periplasmic protein
Locus tag: NGR_b11210
Name: irp6A
Funciton: Iron ABC transporter periplasmic protein
Locus tag: NGR_b11220
Name: irp6B
Funciton: Iron ABC transporter permease component
Locus tag: NGR_b11230
Name: irp6C
Funciton: Iron ABC transporter, ATP-binding protein
NGR_b11200
irp6A
Iron ABC transporter periplasmic protein
NGR_b11210
irp6A
Iron ABC transporter periplasmic protein
NGR_b11220
irp6B
Iron ABC transporter permease component
NGR_b11230
irp6C
Iron ABC transporter, ATP-binding protein
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