Regulon of Irr in Sinorhizobium meliloti 1021

Properties
Regulator type:	Transcription factor
TF locus tag:	SMc00329
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Heme
Regulog:	Irr - Rhizobiales
Statistics of regulated genes:
- Genes	20
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 122 sites [see more]

Member of regulog collections

By trascription factor - Irr
By taxonomy - Rhizobiales
By TF family - FUR
By effector - Heme
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -118 Score: 4.9 Sequence: AACTTCAAGCCGTTCTAAACT Locus tag: SMc00402 Name: iprA Funciton: Iron-regulated protein A precursor
	SMc00402	iprA	Iron-regulated protein A precursor
Position: -119 Score: 5.3 Sequence: AGTTTAGAATCGCTCTAATGC Locus tag: SMc03787 Name: bfd Funciton: [2Fe-2S]-binding protein, bacterioferritin Locus tag: SMc03786 Name: bfr Funciton: Bacterioferritin
	SMc03787	bfd	[2Fe-2S]-binding protein, bacterioferritin
	SMc03786	bfr	Bacterioferritin
Position: -60 Score: 6 Sequence: ATTTTGGAACAATTCTAAAAA Locus tag: SMc01119 Name: fssA Funciton: putative nifU-like iron-sulphur cluster scaffold protein
	SMc01119	fssA	putative nifU-like iron-sulphur cluster scaffold protein
Position: -133 Score: 6.2 Sequence: ACTTTAGAACCGTTCAAAACT Locus tag: SMc00529 Name: sufS2 Funciton: Cysteine desulfurase (EC 2.8.1.7) Locus tag: SMc00530 Name: sufB Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein Locus tag: SMc00531 Name: sufC Funciton: ABC transporter involved in Fe-S cluster assembly, ATP-binding protein Locus tag: SMc00532 Name: sufD Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein Locus tag: SMc00533 Name: sufS1 Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Locus tag: SMc00302 Name: PF01883 Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly Locus tag: SMc00301 Name: sufA Funciton: Iron binding protein SufA for iron-sulfur cluster assembly
	SMc00529	sufS2	Cysteine desulfurase (EC 2.8.1.7)
	SMc00530	sufB	ABC transporter involved in Fe-S cluster assembly, permease protein
	SMc00531	sufC	ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
	SMc00532	sufD	ABC transporter involved in Fe-S cluster assembly, permease protein
	SMc00533	sufS1	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
	SMc00302	PF01883	PaaD-like protein (DUF59) involved in Fe-S cluster assembly
	SMc00301	sufA	Iron binding protein SufA for iron-sulfur cluster assembly
Position: -31 Score: 5.8 Sequence: TAATTAGAATTATTCTAAAGA Locus tag: SMc00359 Name: mbfA Funciton: membrane-bound ferritin
	SMc00359	mbfA	membrane-bound ferritin
Position: -72 Score: 5.9 Sequence: TTTTTGGAATTGTTCCAAACT Locus tag: SMc00785 Name: rirA Funciton: Iron-responsive transcriptional regulator RirA, Rrf2 family
	SMc00785	rirA	Iron-responsive transcriptional regulator RirA, Rrf2 family
Position: -246 Score: 6 Sequence: ATTTTGGAATGGTTCAAAACT Locus tag: SMc03104 Name: hemA Funciton: 5-aminolevulinate synthase (EC 2.3.1.37)
	SMc03104	hemA	5-aminolevulinate synthase (EC 2.3.1.37)
Position: -148 Score: 5.9 Sequence: AGTTTGGAACAATTCCAAAAA Locus tag: SMc00784 Name: fbpA Funciton: Ferric iron ABC transporter, periplasmic protein
	SMc00784	fbpA	Ferric iron ABC transporter, periplasmic protein
Position: -65 Score: 5.4 Sequence: TTTTTAGAAGGATTTGAAACT Locus tag: SMc04019 Name: hemH Funciton: Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)
	SMc04019	hemH	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)
Position: -86 Score: 5.3 Sequence: TGTTTGGAAGCGTTCTAAAAG Locus tag: SMb21432 Name: irp6A Funciton: Iron ABC transporter periplasmic protein Locus tag: SMb21431 Name: irp6A Funciton: Iron ABC transporter periplasmic protein Locus tag: SMb21430 Name: irp6B Funciton: Iron ABC transporter permease component Locus tag: SMb21429 Name: irp6C Funciton: Iron ABC transporter, ATP-binding protein
	SMb21432	irp6A	Iron ABC transporter periplasmic protein
	SMb21431	irp6A	Iron ABC transporter periplasmic protein
	SMb21430	irp6B	Iron ABC transporter permease component
	SMb21429	irp6C	Iron ABC transporter, ATP-binding protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Irr in Sinorhizobium meliloti 1021

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --