Regulon of NikR in Pseudomonas putida KT2440

Properties
Regulator type:	Transcription factor
TF locus tag:	PP3341
Regulator family:	NikR
Regulation mode:	repressor
Biological process:	Nickel homeostasis
Effector:	Nickel ion, (Ni2+)
Regulog:	NikR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

By trascription factor - NikR
By taxonomy - Pseudomonadaceae
By TF family - NikR
By effector - Nickel ion, (Ni2+)
By pathway - Nickel homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -41 Score: 7.4 Sequence: GTATGAT-(14)-ATCTTAC Locus tag: PP3341 Name: NikR Funciton: Nickel responsive regulator NikR, CopG family
	PP3341	NikR	Nickel responsive regulator NikR, CopG family
Position: -74 Score: 7.4 Sequence: GTAAGAT-(14)-ATCATAC Locus tag: PP3342 Name: nikA Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Locus tag: PP3343 Name: nikB Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3) Locus tag: PP3344 Name: nikC Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3) Locus tag: PP3345 Name: nikD Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) Locus tag: PP3346 Name: nikE Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
	PP3342	nikA	Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
	PP3343	nikB	Nickel transport system permease protein NikB (TC 3.A.1.5.3)
	PP3344	nikC	Nickel transport system permease protein NikC (TC 3.A.1.5.3)
	PP3345	nikD	Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
	PP3346	nikE	Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)

Export
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