Regulon of HexR in Rhodoferax ferrireducens DSM 15236
| Regulator type: | Transcription factor |
| TF locus tag: | Rfer_1124 |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Regulog: | HexR - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By trascription factor - HexR
- By TF family - RpiR
- By effector - 2-keto-3-deoxy-6-phosphogluconate
- By pathway - Central carbohydrate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -123
Score: 5.7 Sequence: ATGAAACTAAGTTACAT
Locus tag: Rfer_1125
Name: zwf Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: Rfer_1124
Name: hexR Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
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zwf
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Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
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hexR
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Central carbohydrate metabolism transcription regulator HexR, RpiR family
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Position: -32
Score: 4.9 Sequence: ATGTAATTAAGTTACCA
Locus tag: Rfer_2060
Name: edd Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: Rfer_2061
Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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edd
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Phosphogluconate dehydratase (EC 4.2.1.12)
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eda
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2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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Position: -29
Score: 5.3 Sequence: TGGAAACTTGATTACAA
Locus tag: Rfer_0205
Name: pykA Funciton: Pyruvate kinase (EC 2.7.1.40) |
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pykA
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Pyruvate kinase (EC 2.7.1.40)
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Position: -108
Score: 4.9 Sequence: ATGTAACTTAGTTTCAT
Locus tag: Rfer_1126
Name: tal Funciton: Transaldolase (EC 2.2.1.2)
Locus tag: Rfer_1127
Name: pgi Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
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tal
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Transaldolase (EC 2.2.1.2)
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pgi
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Glucose-6-phosphate isomerase (EC 5.3.1.9)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |