Regulon of HexR1 in Pseudomonas mendocina ymp
| Regulator type: | Transcription factor |
| TF locus tag: | Pmen_4485 |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Regulog: | HexR1 - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - HexR
- By taxonomy - Pseudomonadaceae
- By TF family - RpiR
- By effector - 2-keto-3-deoxy-6-phosphogluconate
- By pathway - Central carbohydrate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -181
Score: 5.8 Sequence: TTGTAGTTTTACTACTA
Position: -128
Score: 6.3 Sequence: ATGTAGTAAAACTACAA
Locus tag: Pmen_0576
Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: Pmen_0575
Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
|||
|
aceE
|
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
|
||
|
aceF
|
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
|
||
|
Position: -131
Score: 6.3 Sequence: TTGTAGTTATACTACAT
Locus tag: Pmen_4486
Name: zwf Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) |
|||
|
zwf
|
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
|
||
|
Position: -105
Score: 6.3 Sequence: ATGTAGTATAACTACAA
Locus tag: Pmen_4485
Name: hexR1 Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
|||
|
hexR1
|
Central carbohydrate metabolism transcription regulator HexR, RpiR family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |