Regulon of Cobalamin in Bacteroides plebeius DSM 17135

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Bacteroidaceae
Under regulation:
- Genes	21
- Operons	4

Member of regulog collections

By taxonomy - Bacteroidaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -222 Score: 81.2 Sequence: TTTGTCCTGCTTTTC... Locus tag: BACPLE_03828 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: BACPLE_03827 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	BACPLE_03828	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	BACPLE_03827	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -259 Score: 105.6 Sequence: TTACCTTTGCCCTCA... Locus tag: BACPLE_00041 Name: btuB1 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACPLE_00040 Name: null Funciton: Hypothetical protein Locus tag: BACPLE_00039 Name: null Funciton: Hypothetical protein Locus tag: BACPLE_00038 Name: null Funciton: Hypothetical protein Locus tag: BACPLE_00037 Name: null Funciton: Hypothetical protein
	BACPLE_00041	btuB1	Outer membrane vitamin B12 receptor BtuB
	BACPLE_00040		Hypothetical protein
	BACPLE_00039		Hypothetical protein
	BACPLE_00038		Hypothetical protein
	BACPLE_00037		Hypothetical protein
Position: -276 Score: 94.2 Sequence: ATGTATATTTGCAAT... Locus tag: BACPLE_03025 Name: btuB1 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACPLE_03024 Name: null Funciton: Hypothetical protein Locus tag: BACPLE_03023 Name: btuF1 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF1 Locus tag: BACPLE_03022 Name: btuC1 Funciton: Vitamin B12 ABC transporter, permease component BtuC1 Locus tag: BACPLE_03021 Name: btuD1 Funciton: Putative vitamin B12 ABC transporter, ATP-binding protein
	BACPLE_03025	btuB1	Outer membrane vitamin B12 receptor BtuB
	BACPLE_03024		Hypothetical protein
	BACPLE_03023	btuF1	Vitamin B12 ABC transporter, B12-binding component BtuF1
	BACPLE_03022	btuC1	Vitamin B12 ABC transporter, permease component BtuC1
	BACPLE_03021	btuD1	Putative vitamin B12 ABC transporter, ATP-binding protein
Position: -345 Score: 102.6 Sequence: TTTTGCAATCAGGAA... Locus tag: BACPLE_02584 Name: null Funciton: Hypothetical protein Locus tag: BACPLE_02585 Name: null Funciton: Putative cell surface protein Locus tag: BACPLE_02586 Name: null Funciton: Putative cell surface protein Locus tag: BACPLE_02587 Name: null Funciton: Putative cell wall biogenesis protein secretory protein Locus tag: BACPLE_02588 Name: null Funciton: Putative surface layer protein secretory protein Locus tag: BACPLE_02589 Name: btuB2 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACPLE_02590 Name: btuF2 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF1 Locus tag: BACPLE_02591 Name: btuC2 Funciton: Vitamin B12 ABC transporter, permease component BtuC1 Locus tag: BACPLE_02592 Name: btuD2 Funciton: Vitamin B12 ABC transporter, ATPase component
	BACPLE_02584		Hypothetical protein
	BACPLE_02585		Putative cell surface protein
	BACPLE_02586		Putative cell surface protein
	BACPLE_02587		Putative cell wall biogenesis protein secretory protein
	BACPLE_02588		Putative surface layer protein secretory protein
	BACPLE_02589	btuB2	Outer membrane vitamin B12 receptor BtuB
	BACPLE_02590	btuF2	Vitamin B12 ABC transporter, B12-binding component BtuF1
	BACPLE_02591	btuC2	Vitamin B12 ABC transporter, permease component BtuC1
	BACPLE_02592	btuD2	Vitamin B12 ABC transporter, ATPase component

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Cobalamin in Bacteroides plebeius DSM 17135

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --