Regulon of Cobalamin in Bacteroides coprophilus DSM 18228

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Bacteroidaceae
Under regulation:
- Genes	15
- Operons	3

Member of regulog collections

By taxonomy - Bacteroidaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -227 Score: 88.7 Sequence: TTTGTATCGCTTTTC... Locus tag: BACCOPRO_02553 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: BACCOPRO_02554 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	BACCOPRO_02553	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	BACCOPRO_02554	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -272 Score: 92.8 Sequence: TCCTACCTTTGCGAA... Locus tag: BACCOPRO_03547 Name: btuB1 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACCOPRO_03546 Name: null Funciton: Hypothetical protein Locus tag: BACCOPRO_03545 Name: btuF1 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF1 Locus tag: BACCOPRO_03544 Name: btuC1 Funciton: Vitamin B12 ABC transporter, permease component BtuC1 Locus tag: BACCOPRO_03543 Name: btuD1 Funciton: Putative vitamin B12 ABC transporter, ATP-binding protein
	BACCOPRO_03547	btuB1	Outer membrane vitamin B12 receptor BtuB
	BACCOPRO_03546		Hypothetical protein
	BACCOPRO_03545	btuF1	Vitamin B12 ABC transporter, B12-binding component BtuF1
	BACCOPRO_03544	btuC1	Vitamin B12 ABC transporter, permease component BtuC1
	BACCOPRO_03543	btuD1	Putative vitamin B12 ABC transporter, ATP-binding protein
Position: -344 Score: 106.3 Sequence: TTTTTGTAATTGGAA... Locus tag: BACCOPRO_02029 Name: null Funciton: Hypothetical protein Locus tag: BACCOPRO_02030 Name: null Funciton: Putative cell surface protein Locus tag: BACCOPRO_02031 Name: null Funciton: Putative cell wall biogenesis protein secretory protein Locus tag: BACCOPRO_02032 Name: null Funciton: Putative surface layer protein secretory protein Locus tag: BACCOPRO_02033 Name: null Funciton: Transposase Locus tag: BACCOPRO_02034 Name: btuB2 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACCOPRO_02035 Name: btuF2 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF1 Locus tag: BACCOPRO_02036 Name: btuC2 Funciton: Vitamin B12 ABC transporter, permease component BtuC1
	BACCOPRO_02029		Hypothetical protein
	BACCOPRO_02030		Putative cell surface protein
	BACCOPRO_02031		Putative cell wall biogenesis protein secretory protein
	BACCOPRO_02032		Putative surface layer protein secretory protein
	BACCOPRO_02033		Transposase
	BACCOPRO_02034	btuB2	Outer membrane vitamin B12 receptor BtuB
	BACCOPRO_02035	btuF2	Vitamin B12 ABC transporter, B12-binding component BtuF1
	BACCOPRO_02036	btuC2	Vitamin B12 ABC transporter, permease component BtuC1

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD