Regulon of Cobalamin in Bacteroides uniformis ATCC 8492
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Bacteroidaceae |
| Under regulation: | |
| - Genes | 26 |
| - Operons | 5 |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -329
Score: 99.4 Sequence: ATCTTTGTCCCAGTT...
Locus tag: BACUNI_02913
Name: btuB3 Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: BACUNI_02914
Name: null Funciton: Hypothetical protein
Locus tag: BACUNI_02915
Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: BACUNI_02916
Name: btuN Funciton: Optional hypothetical component of the B12 transporter BtuN
Locus tag: BACUNI_02917
Name: btuS Funciton: B12-related chelatase BtuS
Locus tag: BACUNI_02918
Name: btuV Funciton: Predicted component of B12-related transporter
Locus tag: BACUNI_02919
Name: btuT Funciton: Hypothetical transporter BtuT for various metalloporphyrins
Locus tag: BACUNI_02920
Name: btuU Funciton: Predicted component of B12-related transporter
Locus tag: BACUNI_02921
Name: btuB4 Funciton: B12-regulated TonB-dependent outer membrane receptor
Locus tag: BACUNI_02922
Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) |
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btuB3
|
Outer membrane vitamin B12 receptor BtuB
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Hypothetical protein
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cbiK
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Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
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btuN
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Optional hypothetical component of the B12 transporter BtuN
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btuS
|
B12-related chelatase BtuS
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btuV
|
Predicted component of B12-related transporter
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btuT
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Hypothetical transporter BtuT for various metalloporphyrins
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btuU
|
Predicted component of B12-related transporter
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btuB4
|
B12-regulated TonB-dependent outer membrane receptor
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cbiK
|
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
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Position: -341
Score: 99.2 Sequence: TTATCTTTGCCCGCG...
Locus tag: BACUNI_02911
Name: pccC Funciton: Biotin carboxylase of propionyl-CoA carboxylase (EC 6.3.4.14)
Locus tag: BACUNI_02910
Name: pccA Funciton: Biotin carboxyl carrier protein of propionyl-CoA carboxylase
Locus tag: BACUNI_02909
Name: pccB Funciton: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)
Locus tag: BACUNI_02908
Name: cbtD Funciton: Predicted cobalt transporter in Bacteroides_Porphyromonas |
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pccC
|
Biotin carboxylase of propionyl-CoA carboxylase (EC 6.3.4.14)
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pccA
|
Biotin carboxyl carrier protein of propionyl-CoA carboxylase
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pccB
|
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)
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cbtD
|
Predicted cobalt transporter in Bacteroides_Porphyromonas
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Position: -336
Score: 110 Sequence: AATTTTGCAGTCGGG...
Locus tag: BACUNI_02897
Name: null Funciton: Hypothetical protein
Locus tag: BACUNI_02896
Name: null Funciton: Putative cell surface protein
Locus tag: BACUNI_02895
Name: null Funciton: Putative cell wall biogenesis protein secretory protein
Locus tag: BACUNI_02894
Name: null Funciton: Putative surface layer protein secretory protein
Locus tag: BACUNI_02893
Name: btuB2 Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: BACUNI_02892
Name: btuF2 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF1
Locus tag: BACUNI_02891
Name: btuC2 Funciton: Vitamin B12 ABC transporter, permease component BtuC1
Locus tag: BACUNI_02890
Name: btuD2 Funciton: Vitamin B12 ABC transporter, ATPase component
Locus tag: BACUNI_02889
Name: null Funciton: Hypothetical protein |
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Hypothetical protein
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Putative cell surface protein
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Putative cell wall biogenesis protein secretory protein
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Putative surface layer protein secretory protein
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btuB2
|
Outer membrane vitamin B12 receptor BtuB
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btuF2
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Vitamin B12 ABC transporter, B12-binding component BtuF1
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btuC2
|
Vitamin B12 ABC transporter, permease component BtuC1
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btuD2
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Vitamin B12 ABC transporter, ATPase component
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Hypothetical protein
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Position: 2122
Score: 106.2 Sequence: TATCTTTGTCATGCA...
Locus tag: BACUNI_01435
Name: BT1483 Funciton: two-component system sensor histidine kinase |
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BT1483
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two-component system sensor histidine kinase
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Position: -100
Score: 103.5 Sequence: CCTATCTTTGTCCAC...
Locus tag: BACUNI_04579
Name: btuB1 Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: BACUNI_04578
Name: null Funciton: Hypothetical protein |
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btuB1
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Outer membrane vitamin B12 receptor BtuB
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Hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |