Regulon of Cobalamin in Bacteroides ovatus ATCC 8483

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Bacteroidaceae
Under regulation:
- Genes	25
- Operons	7

Member of regulog collections

By taxonomy - Bacteroidaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -350 Score: 89.9 Sequence: ACTTTGCCGCCAACA... Locus tag: BACOVA_00801 Name: nrdD2 Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: BACOVA_00802 Name: nrdG2 Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	BACOVA_00801	nrdD2	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	BACOVA_00802	nrdG2	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -227 Score: 86.3 Sequence: TCTTTGTATCTGGTT... Locus tag: BACOVA_01422 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: BACOVA_01423 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	BACOVA_01422	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	BACOVA_01423	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -352 Score: 102.5 Sequence: CTTAACTTTGCACCA... Locus tag: BACOVA_04709 Name: null Funciton: Hypothetical protein Locus tag: BACOVA_04708 Name: null Funciton: Putative cell surface protein Locus tag: BACOVA_04707 Name: null Funciton: Putative cell wall biogenesis protein secretory protein Locus tag: BACOVA_04706 Name: null Funciton: Putative surface layer protein secretory protein Locus tag: BACOVA_04705 Name: btuB2 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACOVA_04704 Name: btuF2 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF1 Locus tag: BACOVA_04703 Name: btuC2 Funciton: Vitamin B12 ABC transporter, permease component BtuC1 Locus tag: BACOVA_04702 Name: btuD2 Funciton: Vitamin B12 ABC transporter, ATPase component Locus tag: BACOVA_04701 Name: null Funciton: Putative membrane protein Locus tag: BACOVA_04700 Name: null Funciton: Probable integral membrane protein
	BACOVA_04709		Hypothetical protein
	BACOVA_04708		Putative cell surface protein
	BACOVA_04707		Putative cell wall biogenesis protein secretory protein
	BACOVA_04706		Putative surface layer protein secretory protein
	BACOVA_04705	btuB2	Outer membrane vitamin B12 receptor BtuB
	BACOVA_04704	btuF2	Vitamin B12 ABC transporter, B12-binding component BtuF1
	BACOVA_04703	btuC2	Vitamin B12 ABC transporter, permease component BtuC1
	BACOVA_04702	btuD2	Vitamin B12 ABC transporter, ATPase component
	BACOVA_04701		Putative membrane protein
	BACOVA_04700		Probable integral membrane protein
Position: -316 Score: 90.5 Sequence: TATCTTTGCCCCCCG... Locus tag: BACOVA_01465 Name: pccC Funciton: Biotin carboxylase of propionyl-CoA carboxylase (EC 6.3.4.14) Locus tag: BACOVA_01464 Name: pccA Funciton: Biotin carboxyl carrier protein of propionyl-CoA carboxylase Locus tag: BACOVA_01463 Name: pccB Funciton: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)
	BACOVA_01465	pccC	Biotin carboxylase of propionyl-CoA carboxylase (EC 6.3.4.14)
	BACOVA_01464	pccA	Biotin carboxyl carrier protein of propionyl-CoA carboxylase
	BACOVA_01463	pccB	Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)
Position: -425 Score: 93.6 Sequence: CTATCTTTGCCCCTG... Locus tag: BACOVA_03267 Name: cbtD Funciton: Predicted cobalt transporter in Bacteroides_Porphyromonas
	BACOVA_03267	cbtD	Predicted cobalt transporter in Bacteroides_Porphyromonas
Position: -382 Score: 97 Sequence: TATCTTTGTCGCGCA... Locus tag: BACOVA_04219 Name: btuB1 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACOVA_04220 Name: null Funciton: Hypothetical protein Locus tag: BACOVA_04221 Name: null Funciton: Hypothetical protein
	BACOVA_04219	btuB1	Outer membrane vitamin B12 receptor BtuB
	BACOVA_04220		Hypothetical protein
	BACOVA_04221		Hypothetical protein
Position: -536 Score: 85.5 Sequence: TCTAACTTTGTGCCA... Locus tag: BACOVA_03265 Name: btuB1 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACOVA_03264 Name: null Funciton: Hypothetical protein Locus tag: BACOVA_03263 Name: null Funciton: Hypothetical protein Locus tag: BACOVA_03262 Name: null Funciton: Putative cell surface protein
	BACOVA_03265	btuB1	Outer membrane vitamin B12 receptor BtuB
	BACOVA_03264		Hypothetical protein
	BACOVA_03263		Hypothetical protein
	BACOVA_03262		Putative cell surface protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Cobalamin in Bacteroides ovatus ATCC 8483

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --