Regulon of Cobalamin in Ralstonia solanacearum GMI1000

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Ralstonia
Under regulation:
- Genes	10
- Operons	2

Member of regulog collections

By taxonomy - Ralstonia
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -278 Score: 121.5 Sequence: CATCCCGCCTCACGA... Locus tag: RSp0628 Name: hoxN Funciton: HoxN/HupN/NixA family cobalt transporter Locus tag: RS03740 Name: cbiW Funciton: Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis Locus tag: RSp0626 Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis Locus tag: RS03742 Name: chlID Funciton: ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis
	RSp0628	hoxN	HoxN/HupN/NixA family cobalt transporter
	RS03740	cbiW	Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
	RSp0626	cobN	CobN component of cobalt chelatase involved in B12 biosynthesis
	RS03742	chlID	ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis
Position: -396 Score: 49 Sequence: GTTACACTCGCCGCG... Locus tag: RS02718 Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: RS02719 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: RS02720 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: RSc2397 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: RSc2396 Name: cobS Funciton: Cobalamin synthase Locus tag: RS02727 Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
	RS02718	btuB	Outer membrane vitamin B12 receptor BtuB
	RS02719	btuC	Vitamin B12 ABC transporter, permease component BtuC
	RS02720	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	RSc2397	cobT	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
	RSc2396	cobS	Cobalamin synthase
	RS02727	cobC	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD