Regulon of Cobalamin in Paenibacillus sp. JDR-2

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Bacillales
Under regulation:
- Genes	14
- Operons	2

Member of regulog collections

By taxonomy - Bacillales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -365 Score: 102.5 Sequence: ATACGAGATAAGTAT... Locus tag: Pjdr2_2684 Name: Pjdr2_2684 Funciton: S-layer domain protein Locus tag: Pjdr2_2685 Name: Pjdr2_2685 Funciton: Hypothetical protein Locus tag: Pjdr2_2686 Name: Pjdr2_2686 Funciton: Transmembrane component of B12-regulated ECF transporter Locus tag: Pjdr2_2687 Name: Pjdr2_2687 Funciton: Duplicated ATPase component B12-regulated ECF transporter Locus tag: Pjdr2_2688 Name: Pjdr2_2688 Funciton: Substrate-specific component of B12-regulated ECF transporter
	Pjdr2_2684	Pjdr2_2684	S-layer domain protein
	Pjdr2_2685	Pjdr2_2685	Hypothetical protein
	Pjdr2_2686	Pjdr2_2686	Transmembrane component of B12-regulated ECF transporter
	Pjdr2_2687	Pjdr2_2687	Duplicated ATPase component B12-regulated ECF transporter
	Pjdr2_2688	Pjdr2_2688	Substrate-specific component of B12-regulated ECF transporter
Position: -357 Score: 95.1 Sequence: ACGAATAAATCATGG... Locus tag: Pjdr2_3355 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: Pjdr2_3354 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Pjdr2_3353 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: Pjdr2_3352 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: Pjdr2_3351 Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: Pjdr2_3350 Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase Locus tag: Pjdr2_3349 Name: cobS Funciton: Cobalamin synthase Locus tag: Pjdr2_3348 Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Locus tag: Pjdr2_3347 Name: cbiZ Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
	Pjdr2_3355	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	Pjdr2_3354	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Pjdr2_3353	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	Pjdr2_3352	cobT	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
	Pjdr2_3351	cobU	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
	Pjdr2_3350	cbiB	Adenosylcobinamide-phosphate synthase
	Pjdr2_3349	cobS	Cobalamin synthase
	Pjdr2_3348	cobD	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
	Pjdr2_3347	cbiZ	Adenosylcobinamide amidohydrolase (EC 3.5.1.90)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD