Regulon of Cobalamin in Shewanella sp MR-7

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Shewanellaceae
Under regulation:
- Genes	10
- Operons	2

Member of regulog collections

By taxonomy - Shewanellaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -342 Score: 74.2 Sequence: TTTAGTCAACCTTCT... Locus tag: Shewmr7_0651 Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
	Shewmr7_0651	btuB	Outer membrane vitamin B12 receptor BtuB
Position: -347 Score: 59.3 Sequence: CTCAAAGGTCGCAGA... Locus tag: Shewmr7_3182 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: Shewmr7_3181 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Shewmr7_3180 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: Shewmr7_3179 Name: cobS Funciton: Cobalamin synthase Locus tag: Shewmr7_3178 Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: Shewmr7_3177 Name: cbiP Funciton: Cobyric acid synthase Locus tag: Shewmr7_3176 Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Locus tag: Shewmr7_3175 Name: Shewmr7_3175 Funciton: Hypothetical protein Locus tag: Shewmr7_3174 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
	Shewmr7_3182	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	Shewmr7_3181	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Shewmr7_3180	cobT	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
	Shewmr7_3179	cobS	Cobalamin synthase
	Shewmr7_3178	cobU	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
	Shewmr7_3177	cbiP	Cobyric acid synthase
	Shewmr7_3176	btuR	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
	Shewmr7_3175	Shewmr7_3175	Hypothetical protein
	Shewmr7_3174	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD