Regulon of Cobalamin in Shewanella sp MR-4

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Shewanellaceae
Under regulation:
- Genes	10
- Operons	2

Member of regulog collections

By taxonomy - Shewanellaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -341 Score: 74.7 Sequence: TTTTTAGTCAACCTT... Locus tag: Shewmr4_3302 Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
	Shewmr4_3302	btuB	Outer membrane vitamin B12 receptor BtuB
Position: -345 Score: 59.4 Sequence: CAAAGGTCGCAGAAA... Locus tag: Shewmr4_0840 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: Shewmr4_0841 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Shewmr4_0842 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: Shewmr4_0843 Name: cobS Funciton: Cobalamin synthase Locus tag: Shewmr4_0844 Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: Shewmr4_0845 Name: cbiP Funciton: Cobyric acid synthase Locus tag: Shewmr4_0846 Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Locus tag: Shewmr4_0847 Name: Shewmr4_0847 Funciton: Hypothetical protein Locus tag: Shewmr4_0848 Name: null Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
	Shewmr4_0840	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	Shewmr4_0841	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Shewmr4_0842	cobT	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
	Shewmr4_0843	cobS	Cobalamin synthase
	Shewmr4_0844	cobU	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
	Shewmr4_0845	cbiP	Cobyric acid synthase
	Shewmr4_0846	btuR	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
	Shewmr4_0847	Shewmr4_0847	Hypothetical protein
	Shewmr4_0848		Vitamin B12 ABC transporter, B12-binding component BtuF

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD