Regulon of TPP in Staphylococcus haemolyticus JCSC1435

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Staphylococcaceae
Under regulation:
- Genes	13
- Operons	4

Member of regulog collections

By taxonomy - Staphylococcaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -161 Score: 71 Sequence: AAAAAATCACTAGGG... Locus tag: SH0246 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	SH0246	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Position: -185 Score: 77.1 Sequence: AAATGCACTAGGGGT... Locus tag: SH1880 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SH1881 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SH1882 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	SH1880	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	SH1881	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	SH1882	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -177 Score: 84.1 Sequence: AATGCTACTAGGGGA... Locus tag: SH0940 Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Locus tag: SH0941 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: SH0942 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: SH0943 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	SH0940	tenA	4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
	SH0941	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	SH0942	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	SH0943	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -171 Score: 82.1 Sequence: ATTTATCCACTGGAA... Locus tag: SH0565 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: SH0564 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: SH0563 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: SH0562 Name: thiG Funciton: Thiazole synthase Locus tag: SH0561 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
	SH0565	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	SH0564	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	SH0563	thiS	Sulfur carrier protein ThiS
	SH0562	thiG	Thiazole synthase
	SH0561	thiF	Sulfur carrier protein adenylyltransferase ThiF

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD