Regulon of TPP in Staphylococcus epidermidis ATCC 12228

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Staphylococcaceae
Under regulation:
- Genes	14
- Operons	5

Member of regulog collections

By taxonomy - Staphylococcaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -159 Score: 67.3 Sequence: CTAGTATCACTAGGG... Locus tag: SE0251 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	SE0251	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Position: -188 Score: 69.7 Sequence: TTGAACGCACTAGGG... Locus tag: SE0775 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SE0774 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SE0773 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	SE0775	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	SE0774	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	SE0773	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -195 Score: 81 Sequence: TTATATGCACTAGGG... Locus tag: SE0324 Name: oarX Funciton: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
	SE0324	oarX	Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
Position: -171 Score: 85.1 Sequence: TATTTGCTACTAGGG... Locus tag: SE1693 Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Locus tag: SE1692 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: SE1691 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: SE1690 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	SE1693	tenA	4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
	SE1692	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	SE1691	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	SE1690	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -295 Score: 86.9 Sequence: TTAACCACTGGAAGT... Locus tag: SE2057 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: SE2058 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: SE2059 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: SE2060 Name: thiG Funciton: Thiazole synthase Locus tag: SE2061 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
	SE2057	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	SE2058	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	SE2059	thiS	Sulfur carrier protein ThiS
	SE2060	thiG	Thiazole synthase
	SE2061	thiF	Sulfur carrier protein adenylyltransferase ThiF

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD