Regulon of TPP in Staphylococcus carnosus subsp. carnosus TM300

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Staphylococcaceae
Under regulation:
- Genes	15
- Operons	5

Member of regulog collections

By taxonomy - Staphylococcaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -165 Score: 73.3 Sequence: ATAAAATTGCTAGGG... Locus tag: Sca_1596 Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Locus tag: Sca_1595 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: Sca_1594 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: Sca_1593 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	Sca_1596	tenA	4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
	Sca_1595	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	Sca_1594	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	Sca_1593	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -280 Score: 71.5 Sequence: TTCATTGCTAGGGGT... Locus tag: Sca_0594 Name: thiC Funciton: Phosphomethylpyrimidine synthase ThiC Locus tag: Sca_0595 Name: thiC Funciton: Phosphomethylpyrimidine synthase ThiC
	Sca_0594	thiC	Phosphomethylpyrimidine synthase ThiC
	Sca_0595	thiC	Phosphomethylpyrimidine synthase ThiC
Position: -209 Score: 77.2 Sequence: TAGAAAGCACTAGGG... Locus tag: Sca_0700 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: Sca_0699 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: Sca_0698 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	Sca_0700	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	Sca_0699	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	Sca_0698	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -206 Score: 81.3 Sequence: ATACGCACTAGGGGT... Locus tag: Sca_2279 Name: oarX Funciton: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
	Sca_2279	oarX	Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
Position: -280 Score: 78.7 Sequence: AAGTCCACTGGAAGT... Locus tag: Sca_2076 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: Sca_2077 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: Sca_2078 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: Sca_2079 Name: thiG Funciton: Thiazole synthase Locus tag: Sca_2080 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
	Sca_2076	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	Sca_2077	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	Sca_2078	thiS	Sulfur carrier protein ThiS
	Sca_2079	thiG	Thiazole synthase
	Sca_2080	thiF	Sulfur carrier protein adenylyltransferase ThiF

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of TPP in Staphylococcus carnosus subsp. carnosus TM300

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --