Regulon of TPP in Staphylococcus carnosus subsp. carnosus TM300
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Staphylococcaceae |
| Under regulation: | |
| - Genes | 15 |
| - Operons | 5 |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -165
Score: 73.3 Sequence: ATAAAATTGCTAGGG...
Locus tag: Sca_1596
Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
Locus tag: Sca_1595
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Sca_1594
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Sca_1593
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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tenA
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4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
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thiD
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Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Position: -280
Score: 71.5 Sequence: TTCATTGCTAGGGGT...
Locus tag: Sca_0594
Name: thiC Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: Sca_0595
Name: thiC Funciton: Phosphomethylpyrimidine synthase ThiC |
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thiC
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Phosphomethylpyrimidine synthase ThiC
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thiC
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Phosphomethylpyrimidine synthase ThiC
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Position: -209
Score: 77.2 Sequence: TAGAAAGCACTAGGG...
Locus tag: Sca_0700
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: Sca_0699
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: Sca_0698
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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ykoE
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Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoD
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Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoC
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Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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Position: -206
Score: 81.3 Sequence: ATACGCACTAGGGGT...
Locus tag: Sca_2279
Name: oarX Funciton: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX |
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oarX
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Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
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Position: -280
Score: 78.7 Sequence: AAGTCCACTGGAAGT...
Locus tag: Sca_2076
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sca_2077
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Sca_2078
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Sca_2079
Name: thiG Funciton: Thiazole synthase
Locus tag: Sca_2080
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF |
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiO
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Glycine oxidase ThiO (EC 1.4.3.19)
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thiS
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Sulfur carrier protein ThiS
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thiG
|
Thiazole synthase
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thiF
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Sulfur carrier protein adenylyltransferase ThiF
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |