Regulon of TPP in Staphylococcus capitis SK14
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Staphylococcaceae |
| Under regulation: | |
| - Genes | 12 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -188
Score: 74.2 Sequence: GGACGCACTAGGGGT...
Locus tag: STACA0001_2287
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: STACA0001_2288
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: STACA0001_2289
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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ykoE
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Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoD
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Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoC
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Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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Position: -193
Score: 69.9 Sequence: ATTTACACTAGGGGT...
Locus tag: STACA0001_0474
Name: oarX Funciton: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX |
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oarX
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Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
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Position: -177
Score: 76.9 Sequence: TATTAACTACTAGGG...
Locus tag: STACA0001_0798
Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
Locus tag: STACA0001_0797
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: STACA0001_0796
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: STACA0001_0795
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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tenA
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4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
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thiD
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Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Position: -189
Score: 84.5 Sequence: ATCAATCCACTGGAA...
Locus tag: STACA0001_1001
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: STACA0001_1000
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: STACA0001_0998
Name: thiG Funciton: Thiazole synthase
Locus tag: STACA0001_0997
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF |
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiO
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Glycine oxidase ThiO (EC 1.4.3.19)
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thiG
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Thiazole synthase
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thiF
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Sulfur carrier protein adenylyltransferase ThiF
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |