Regulon of TPP in Staphylococcus capitis SK14

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Staphylococcaceae
Under regulation:
- Genes	12
- Operons	4

Member of regulog collections

By taxonomy - Staphylococcaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -188 Score: 74.2 Sequence: GGACGCACTAGGGGT... Locus tag: STACA0001_2287 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: STACA0001_2288 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: STACA0001_2289 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	STACA0001_2287	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	STACA0001_2288	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	STACA0001_2289	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -193 Score: 69.9 Sequence: ATTTACACTAGGGGT... Locus tag: STACA0001_0474 Name: oarX Funciton: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
	STACA0001_0474	oarX	Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
Position: -177 Score: 76.9 Sequence: TATTAACTACTAGGG... Locus tag: STACA0001_0798 Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Locus tag: STACA0001_0797 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: STACA0001_0796 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: STACA0001_0795 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	STACA0001_0798	tenA	4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
	STACA0001_0797	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	STACA0001_0796	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	STACA0001_0795	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -189 Score: 84.5 Sequence: ATCAATCCACTGGAA... Locus tag: STACA0001_1001 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: STACA0001_1000 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: STACA0001_0998 Name: thiG Funciton: Thiazole synthase Locus tag: STACA0001_0997 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
	STACA0001_1001	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	STACA0001_1000	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	STACA0001_0998	thiG	Thiazole synthase
	STACA0001_0997	thiF	Sulfur carrier protein adenylyltransferase ThiF

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD