Regulon of KdgR in Bacillus subtilis subsp. subtilis str. 168
| Regulator type: | Transcription factor |
| TF locus tag: | BSU22120 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Galacturonate utilization; Glucuronate utilization |
| Effector: | 2-keto-3-deoxygluconate |
| Regulog: | KdgR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - LacI
- By effector - 2-keto-3-deoxygluconate
- By pathway - Galacturonate utilization
- By pathway - Glucuronate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -197
Score: 6.1 Sequence: TTTGAAACCGATTTCAAA
Position: -66
Score: 6.2 Sequence: TTTGAAACCGTTACCAAA
Locus tag: BSU22130
Name: kduI Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: BSU22140
Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) |
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kduI
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4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
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kduD
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2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
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Position: -173
Score: 6.2 Sequence: TTTGGTAACGGTTTCAAA
Position: -42
Score: 6.1 Sequence: TTTGAAATCGGTTTCAAA
Locus tag: BSU22120
Name: kdgR Funciton: Transcriptional regulator of pectin utilization, LacI family
Locus tag: BSU22110
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: BSU22100
Name: kdgA Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: BSU22090
Name: kdgT Funciton: 2-keto-3-deoxygluconate permease |
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kdgR
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Transcriptional regulator of pectin utilization, LacI family
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kdgK
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2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
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kdgA
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4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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kdgT
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2-keto-3-deoxygluconate permease
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |