Regulon of CtsR in Bacillus amyloliquefaciens FZB42
| Regulator type: | Transcription factor |
| TF locus tag: | RBAM_001080 |
| Regulator family: | CtsR |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | CtsR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 4 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - CtsR
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -69
Score: 0.6 Sequence: TTTGACC-(3)-ATTGACC
Locus tag: RBAM_031850
Name: clpP Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
|||
|
clpP
|
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
|
||
|
Position: -27
Score: 7.5 Sequence: GGTAAAA-(3)-AGTCAAA
Locus tag: RBAM_033150
Name: gs14 Funciton: General stress protein 14 |
|||
|
gs14
|
General stress protein 14
|
||
|
Position: -38
Score: 8.5 Sequence: AGTCAAA-(3)-AGTCAAA
Locus tag: RBAM_001080
Name: ctsR Funciton: Transcriptional repressor of class III stress genes, CtdR fsmily
Locus tag: RBAM_001090
Name: mcsA Funciton: Modulator of heat shock repressor CtsR, McsA
Locus tag: RBAM_001100
Name: mcsB Funciton: Tyrosine kinase McSB, modulator of heat shock repressor CtsR
Locus tag: RBAM_001110
Name: clpC Funciton: class III stress response-related ATPase, AAA+ superfamily
Locus tag: RBAM_001120
Name: radA Funciton: DNA repair protein RadA
Locus tag: RBAM_001130
Name: yacK Funciton: DNA integrity scanning protein DisA |
|||
|
ctsR
|
Transcriptional repressor of class III stress genes, CtdR fsmily
|
||
|
mcsA
|
Modulator of heat shock repressor CtsR, McsA
|
||
|
mcsB
|
Tyrosine kinase McSB, modulator of heat shock repressor CtsR
|
||
|
clpC
|
class III stress response-related ATPase, AAA+ superfamily
|
||
|
radA
|
DNA repair protein RadA
|
||
|
yacK
|
DNA integrity scanning protein DisA
|
||
|
Position: -85
Score: 7.7 Sequence: AATCAAA-(3)-GGTCAAA
Locus tag: RBAM_013460
Name: clpE Funciton: ATP-dependent Clp protease (class III stress gene) |
|||
|
clpE
|
ATP-dependent Clp protease (class III stress gene)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |