Regulog CtsR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | CtsR |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - CtsR
- By effector - Heat shock
- By pathway - Heat shock response
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 8 | 3 |
| Bacillus amyloliquefaciens FZB42 | 9 | 4 |
| Bacillus pumilus SAFR-032 | 9 | 4 |
| Bacillus licheniformis DSM 13 | 10 | 5 |
| Anoxybacillus flavithermus WK1 | 8 | 4 |
| Geobacillus kaustophilus HTA426 | 8 | 4 |
| Bacillus cereus ATCC 14579 | 10 | 5 |
| Bacillus halodurans C-125 | 9 | 4 |
| Bacillus clausii KSM-K16 | 8 | 3 |
| Oceanobacillus iheyensis HTE831 | 7 | 3 |
| Paenibacillus sp. JDR-2 | 7 | 2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| clpE |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -84 score = 8.42687 sequence = AGTCAAA-(3)-GGTCAAA Gene: BSU13700: ATP-dependent Clp protease (class III stress gene) |
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Bacillus amyloliquefaciens FZB42 Site: position = -85 score = 7.73477 sequence = AATCAAA-(3)-GGTCAAA Gene: RBAM_013460: ATP-dependent Clp protease (class III stress gene) |
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Bacillus pumilus SAFR-032 Site: position = -89 score = 8.42687 sequence = AGTCAAA-(3)-GGTCAAA Gene: BPUM_1261: ATP-dependent Clp protease (class III stress gene) |
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Bacillus licheniformis DSM 13 Site: position = -84 score = 7.52948 sequence = AGTCAGA-(3)-GGTCAAA Gene: BLi01525: ATP-dependent Clp protease (class III stress gene) |
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Anoxybacillus flavithermus WK1 Site: position = 5 score = 8.42687 sequence = AGTCAAA-(3)-GGTCAAA Gene: Aflv_1984: ATP-dependent Clp protease (class III stress gene) |
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Geobacillus kaustophilus HTA426 Site: position = -87 score = 8.42687 sequence = AGTCAAA-(3)-GGTCAAA Gene: GK0968: ATP-dependent Clp protease (class III stress gene) |
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Bacillus halodurans C-125 Site: position = -86 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: BH2179: ATP-dependent Clp protease (class III stress gene) |
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Bacillus clausii KSM-K16 Site: position = -60 score = 8.42687 sequence = GGTCAAA-(3)-AGTCAAA Gene: ABC3449: ATP-dependent Clp protease (class III stress gene) |
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Oceanobacillus iheyensis HTE831 Site: position = -106 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: OB0881: ATP-dependent Clp protease (class III stress gene) |
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ATP-dependent Clp protease (class III stress gene) |
| CRON 2. | ||||||||||||
| clpB |
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Anoxybacillus flavithermus WK1 Site: position = -34 score = 8.42687 sequence = GGTCAAA-(3)-AGTCAAA Gene: Aflv_2144: Class III stress response-related ATPase |
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Geobacillus kaustophilus HTA426 Site: position = -30 score = 8.42687 sequence = AGTCAAA-(3)-GGTCAAA Gene: GK0799: Class III stress response-related ATPase |
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Bacillus cereus ATCC 14579 Site: position = -36 score = 8.42687 sequence = GGTCAAA-(3)-AGTCAAA Gene: BC1168: Class III stress response-related ATPase |
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Class III stress response-related ATPase |
| CRON 3. | ||||||||||||
| gs14 |
Gene: BSU35990: General stress protein 14 |
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Bacillus amyloliquefaciens FZB42 Site: position = -27 score = 7.52948 sequence = GGTAAAA-(3)-AGTCAAA Gene: RBAM_033150: General stress protein 14 |
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Gene: BLi03696: General stress protein 14 |
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General stress protein 14 |
| CRON 4. | ||||||||||||
| BLi03709 |
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Bacillus pumilus SAFR-032 Site: position = -175 score = 7.97067 sequence = GGTCAAT-(3)-GGTCAAA Gene: BPUM_3100: TM2 domain containing protein |
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Bacillus licheniformis DSM 13 Site: position = -187 score = 7.97067 sequence = GGTCAAT-(3)-GGTCAAA Gene: BLi03709: TM2 domain containing protein |
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Gene: Pjdr2_1115: TM2 domain containing protein |
TM2 domain containing protein |
| CRON 5. | ||||||||||||
| ctsR |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -38 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: BSU00830: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Bacillus amyloliquefaciens FZB42 Site: position = -38 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: RBAM_001080: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Bacillus pumilus SAFR-032 Site: position = -38 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: BPUM_0068: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Bacillus licheniformis DSM 13 Site: position = -39 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: BLi00101: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Anoxybacillus flavithermus WK1 Site: position = -41 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: Aflv_0074: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Geobacillus kaustophilus HTA426 Site: position = -100 score = 8.42687 sequence = GGTCAAA-(3)-AGTCAAA Gene: GK0075: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Bacillus cereus ATCC 14579 Site: position = -38 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: BC0099: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Bacillus halodurans C-125 Site: position = -86 score = 8.42687 sequence = GGTCAAA-(3)-AGTCAAA Gene: BH0100: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Bacillus clausii KSM-K16 Site: position = -90 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: ABC0118: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Oceanobacillus iheyensis HTE831 Site: position = -61 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: OB0090: Transcriptional repressor of class III stress genes, CtdR fsmily |
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Paenibacillus sp. JDR-2 Site: position = -80 score = 8.45821 sequence = AGTCAAA-(3)-AGTCAAA Gene: Pjdr2_5718: Transcriptional repressor of class III stress genes, CtdR fsmily |
Transcriptional repressor of class III stress genes, CtdR fsmily |
| mcsA |
Gene: BSU00840: Modulator of heat shock repressor CtsR, McsA |
Gene: RBAM_001090: Modulator of heat shock repressor CtsR, McsA |
Gene: BPUM_0069: Modulator of heat shock repressor CtsR, McsA |
Gene: BLi00102: Modulator of heat shock repressor CtsR, McsA |
Gene: Aflv_0075: Modulator of heat shock repressor CtsR, McsA |
Gene: GK0076: Modulator of heat shock repressor CtsR, McsA |
Gene: BC0100: Modulator of heat shock repressor CtsR, McsA |
Gene: BH0101: Modulator of heat shock repressor CtsR, McsA |
Gene: ABC0119: Modulator of heat shock repressor CtsR, McsA |
Gene: OB0091: Modulator of heat shock repressor CtsR, McsA |
Gene: Pjdr2_5717: Modulator of heat shock repressor CtsR, McsA |
Modulator of heat shock repressor CtsR, McsA |
| mcsB |
Gene: BSU00850: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: RBAM_001100: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: BPUM_0070: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: BLi00103: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: Aflv_0076: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: GK0077: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: BC0101: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: BH0102: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: ABC0120: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: OB0092: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Gene: Pjdr2_5716: Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
Tyrosine kinase McSB, modulator of heat shock repressor CtsR |
| clpC |
Gene: BSU00860: class III stress response-related ATPase, AAA+ superfamily |
Gene: RBAM_001110: class III stress response-related ATPase, AAA+ superfamily |
Gene: BPUM_0071: class III stress response-related ATPase, AAA+ superfamily |
Gene: BLi00104: class III stress response-related ATPase, AAA+ superfamily |
Gene: Aflv_0077: class III stress response-related ATPase, AAA+ superfamily |
Gene: GK0078: class III stress response-related ATPase, AAA+ superfamily |
Gene: BC0102: class III stress response-related ATPase, AAA+ superfamily |
Gene: BH0103: class III stress response-related ATPase, AAA+ superfamily |
Gene: ABC0121: class III stress response-related ATPase, AAA+ superfamily |
Gene: OB0093: class III stress response-related ATPase, AAA+ superfamily |
Gene: Pjdr2_5715: class III stress response-related ATPase, AAA+ superfamily |
class III stress response-related ATPase, AAA+ superfamily |
| radA |
Gene: BSU00870: DNA repair protein RadA |
Gene: RBAM_001120: DNA repair protein RadA |
Gene: BPUM_0072: DNA repair protein RadA |
Gene: BLi00105: DNA repair protein RadA |
Gene: Aflv_0078: DNA repair protein RadA |
Gene: GK0079: DNA repair protein RadA |
Gene: BC0103: DNA repair protein RadA |
Gene: BH0104: DNA repair protein RadA |
Gene: ABC0122: DNA repair protein RadA |
Gene: OB0094: DNA repair protein RadA |
Gene: Pjdr2_5713: DNA repair protein RadA |
DNA repair protein RadA |
| yacK |
Gene: BSU00880: DNA integrity scanning protein DisA |
Gene: RBAM_001130: DNA integrity scanning protein DisA |
Gene: BPUM_0073: DNA integrity scanning protein DisA |
Gene: BLi00106: DNA integrity scanning protein DisA |
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Gene: BC0104: DNA integrity scanning protein DisA |
Gene: BH0105: DNA integrity scanning protein DisA |
Gene: ABC0123: DNA integrity scanning protein DisA |
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Gene: Pjdr2_5712: DNA integrity scanning protein DisA |
DNA integrity scanning protein DisA |
| CRON 6. | ||||||||||||
| BC2214 |
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Bacillus cereus ATCC 14579 Site: position = -104 score = 6.98729 sequence = CATCAAA-(3)-GGTCAAA Gene: BC2214: Small heat shock protein |
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Small heat shock protein |
| CRON 7. | ||||||||||||
| clpP |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -69 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: BSU34540: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Bacillus amyloliquefaciens FZB42 Site: position = -69 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: RBAM_031850: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Bacillus pumilus SAFR-032 Site: position = -69 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: BPUM_3102: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Bacillus licheniformis DSM 13 Site: position = -70 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: BLi03710: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Anoxybacillus flavithermus WK1 Site: position = -70 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: Aflv_2522: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Geobacillus kaustophilus HTA426 Site: position = -77 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: GK3062: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Bacillus cereus ATCC 14579 Site: position = -65 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: BC5152: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Bacillus halodurans C-125 Site: position = -93 score = -0.130742 sequence = TTTGACC-(3)-TTTGACC Gene: BH3564: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Bacillus clausii KSM-K16 Site: position = -87 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: ABC3026: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Oceanobacillus iheyensis HTE831 Site: position = -89 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: OB2456: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Paenibacillus sp. JDR-2 Site: position = -85 score = 0.745489 sequence = TTTGACT-(3)-TTTGACT Gene: Pjdr2_0175: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
| CRON 8. | ||||||||||||
| BC4452 |
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Bacillus cereus ATCC 14579 Site: position = -179 score = 0.616734 sequence = TTTGACC-(3)-ATTGACC Gene: BC4452: Hypothetical protein |
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Hypothetical protein |
| CRON 9. | ||||||||||||
| sspI |
Gene: BSU28660: Small acid-soluble spore protein SspI |
Gene: RBAM_025730: Small acid-soluble spore protein SspI |
Gene: BPUM_2524: Small acid-soluble spore protein SspI |
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Bacillus licheniformis DSM 13 Site: position = -112 score = -0.151907 sequence = TTTGACT-(3)-TTTGTCT Gene: BLi03018: Small acid-soluble spore protein SspI |
Gene: Aflv_0539: Small acid-soluble spore protein SspI |
Gene: GK2712: Small acid-soluble spore protein SspI |
Gene: BC4563: Small acid-soluble spore protein SspI |
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Bacillus halodurans C-125 Site: position = -165 score = 0.272958 sequence = TTTTCCA-(3)-TTTGACT Gene: BH3113: Small acid-soluble spore protein SspI |
Gene: ABC2682: Small acid-soluble spore protein SspI |
Gene: OB2133: Small acid-soluble spore protein SspI |
Gene: Pjdr2_1121: Small acid-soluble spore protein SspI |
Small acid-soluble spore protein SspI |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |