Regulon of GudR in Bacillus clausii KSM-K16
| Regulator type: | Transcription factor |
| TF locus tag: | ABC0472 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucarate utilization; Galactarate utilization |
| Effector: | |
| Regulog: | GudR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - GntR/Others
- By pathway - Glucarate utilization
- By pathway - Galactarate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -51
Score: 6.5 Sequence: TTAATTTGTCTTACAATAAAA
Locus tag: ABC0471
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: ABC0470
Name: kgsD Funciton: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)
Locus tag: ABC0469
Name: tctB_Gud Funciton: Tripartite tricarboxylate transporter family small permease component, putative transporter for glucarate
Locus tag: ABC0468
Name: tctA_Gud Funciton: Tripartite tricarboxylate transporter family large permease component, putative transporter for glucarate
Locus tag: ABC0467
Name: tctC_Gud Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for glucarate |
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kdgD
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5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
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kgsD
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Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)
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tctB_Gud
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Tripartite tricarboxylate transporter family small permease component, putative transporter for glucarate
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tctA_Gud
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Tripartite tricarboxylate transporter family large permease component, putative transporter for glucarate
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tctC_Gud
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Tripartite tricarboxylate transporter family receptor, putative transporter for glucarate
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Position: -63
Score: 5.9 Sequence: CCTATTTGTATTACAATTAAA
Locus tag: ABC0472
Name: gudR Funciton: Transcriptional regulator for glucarate/galactarate utilization, GntR family |
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gudR
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Transcriptional regulator for glucarate/galactarate utilization, GntR family
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Position: -50
Score: 5.9 Sequence: TCTATTTGTCTTACAATTAAT
Locus tag: ABC0466
Name: ABC0466 Funciton: Putative mannonate dehydratase (EC 4.2.1.8) |
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ABC0466
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Putative mannonate dehydratase (EC 4.2.1.8)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |